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The map label for this gene is 123968070

Identifier: 123968070

GI number: 123968070

Start: 463535

End: 464254

Strand: Reverse

Name: 123968070

Synonym: A9601_05331

Alternate gene names: NA

Gene position: 464254-463535 (Counterclockwise)

Preceding gene: 123968076

Following gene: 123968068

Centisome position: 27.8

GC content: 27.22

Gene sequence:

>720_bases
ATGATAAATCTAACCAAAAACGAAAAAACCATAGGGATTACTGGAGCCTCAGGTGCGCTAGGGAAAGAATTAACAAAGTT
GTTTCGTCAAAAAGGATATAAAGTGATTGGATTTACTCATAGTAAAACTAATTATGAAATAAATCTTGAATCTCCAAATG
AATGGATTACATGGGAATGTGGGAAGGAGTCGTCATTAAAAAAACAATTAGAGCATATAGACATTTTGATTTTGAACCAT
GGTATCTATGATTTGAGTAGAGAAAATTCTAATTATGAAAACTCAATTGAGATAAATGCACTAAGCAAATTCAAATTTTT
AAATTTATTTGAAGATATTGCTCTAAGCAATGATTCACAAACAAAAAAAGAGATTTGGATAAATACATCTGAAGCAGAAA
TATTACCCGCCCTAAATCCATCATATGAGATTAGTAAATCCCTTATCGGTCAATTAGTTTCTTTCAAAAAAAATCTACTG
GATAAAAATACAAAGAAAAAATTAATAATTAAAAAAATCATCTTAGGGCCTTTTAAATCAGAATTAAATCCTCTCGGAAT
AATGAGTCCCAAATTTGTTTCTAAAAAAATTTATGATCTAGCCAATTCAAAAAATTATTTAGTAATAATTAGTCCAAACC
CTTTAACATATGTACTTTTCCCATTGAAAGAATTTTTTAATTATTTATATTGCCAAATTATCTATAAATATAAATCTTAG

Upstream 100 bases:

>100_bases
CAAATATTTATTTATGAGTTTTAATCAAATAAAAAAATAAAATAGTCTTTTTTTGGTAAATTTATTTTAATTCTTTGGTA
TATCATAAAAATCAAGCAAA

Downstream 100 bases:

>100_bases
TGCCTAGAAATCTCGATCTGTCAATATTTCAATACCATCTTTTAAAACAACTATTGTATGCTCCCATTGGGCAGATAGTT
TTCCATCTTTTGTTATTACG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Bifunctional Sterol Desaturase/Short Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Dehydrogenase; Short-Chain Dehydrogenase/Reductase Family Protein; Fatty Acid Hydroxylase; Dehydrogenases With Different Specificities; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MINLTKNEKTIGITGASGALGKELTKLFRQKGYKVIGFTHSKTNYEINLESPNEWITWECGKESSLKKQLEHIDILILNH
GIYDLSRENSNYENSIEINALSKFKFLNLFEDIALSNDSQTKKEIWINTSEAEILPALNPSYEISKSLIGQLVSFKKNLL
DKNTKKKLIIKKIILGPFKSELNPLGIMSPKFVSKKIYDLANSKNYLVIISPNPLTYVLFPLKEFFNYLYCQIIYKYKS

Sequences:

>Translated_239_residues
MINLTKNEKTIGITGASGALGKELTKLFRQKGYKVIGFTHSKTNYEINLESPNEWITWECGKESSLKKQLEHIDILILNH
GIYDLSRENSNYENSIEINALSKFKFLNLFEDIALSNDSQTKKEIWINTSEAEILPALNPSYEISKSLIGQLVSFKKNLL
DKNTKKKLIIKKIILGPFKSELNPLGIMSPKFVSKKIYDLANSKNYLVIISPNPLTYVLFPLKEFFNYLYCQIIYKYKS
>Mature_239_residues
MINLTKNEKTIGITGASGALGKELTKLFRQKGYKVIGFTHSKTNYEINLESPNEWITWECGKESSLKKQLEHIDILILNH
GIYDLSRENSNYENSIEINALSKFKFLNLFEDIALSNDSQTKKEIWINTSEAEILPALNPSYEISKSLIGQLVSFKKNLL
DKNTKKKLIIKKIILGPFKSELNPLGIMSPKFVSKKIYDLANSKNYLVIISPNPLTYVLFPLKEFFNYLYCQIIYKYKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27457; Mature: 27457

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLTKNEKTIGITGASGALGKELTKLFRQKGYKVIGFTHSKTNYEINLESPNEWITWEC
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCEEEEEC
GKESSLKKQLEHIDILILNHGIYDLSRENSNYENSIEINALSKFKFLNLFEDIALSNDSQ
CCCHHHHHHHHHEEEEEEECCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC
TKKEIWINTSEAEILPALNPSYEISKSLIGQLVSFKKNLLDKNTKKKLIIKKIILGPFKS
CCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
ELNPLGIMSPKFVSKKIYDLANSKNYLVIISPNPLTYVLFPLKEFFNYLYCQIIYKYKS
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MINLTKNEKTIGITGASGALGKELTKLFRQKGYKVIGFTHSKTNYEINLESPNEWITWEC
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCEEEEEC
GKESSLKKQLEHIDILILNHGIYDLSRENSNYENSIEINALSKFKFLNLFEDIALSNDSQ
CCCHHHHHHHHHEEEEEEECCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC
TKKEIWINTSEAEILPALNPSYEISKSLIGQLVSFKKNLLDKNTKKKLIIKKIILGPFKS
CCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
ELNPLGIMSPKFVSKKIYDLANSKNYLVIISPNPLTYVLFPLKEFFNYLYCQIIYKYKS
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA