Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967942

Identifier: 123967942

GI number: 123967942

Start: 356249

End: 356440

Strand: Reverse

Name: 123967942

Synonym: A9601_04051

Alternate gene names: NA

Gene position: 356440-356249 (Counterclockwise)

Preceding gene: 123967945

Following gene: 123967941

Centisome position: 21.35

GC content: 36.46

Gene sequence:

>192_bases
ATGCCACTATCGTCATACCGGATGCACAGAATATATATTGCAGCAACCATGAATTATGGTCTTGGTTCTGATGATCCAGA
GGAGTTGGCCTACTACAACAAAATCAGAAAAGAGATTGATGATATGAAAAAACAACCAATTAAAAAAGGAATTTTTCTCA
ATTGGGATACCACCGTAGGAATGGATAAATGA

Upstream 100 bases:

>100_bases
CCCGACGAGGGCACTTGAGCAATTGATAAATATAACTGAGATATCATAGATAACATTTTAACTAGAATTCAAATAAATTT
AAAATAGTTTCCCTTTAGTA

Downstream 100 bases:

>100_bases
ACCTGAATACTTTTTTATTAATTGATGGGAGTTTGATGCTTATTGGTCTTCCTTTATTGATGATTCTTAAAGGCAAAAAT
TGATCAAAATTTCTATACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MPLSSYRMHRIYIAATMNYGLGSDDPEELAYYNKIRKEIDDMKKQPIKKGIFLNWDTTVGMDK

Sequences:

>Translated_63_residues
MPLSSYRMHRIYIAATMNYGLGSDDPEELAYYNKIRKEIDDMKKQPIKKGIFLNWDTTVGMDK
>Mature_62_residues
PLSSYRMHRIYIAATMNYGLGSDDPEELAYYNKIRKEIDDMKKQPIKKGIFLNWDTTVGMDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7403; Mature: 7271

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSSYRMHRIYIAATMNYGLGSDDPEELAYYNKIRKEIDDMKKQPIKKGIFLNWDTTVG
CCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCEEECCCCCCC
MDK
CCC
>Mature Secondary Structure 
PLSSYRMHRIYIAATMNYGLGSDDPEELAYYNKIRKEIDDMKKQPIKKGIFLNWDTTVG
CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCEEECCCCCCC
MDK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA