Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is bfrB
Identifier: 121639759
GI number: 121639759
Start: 4286582
End: 4287127
Strand: Direct
Name: bfrB
Synonym: BCG_3904
Alternate gene names: 121639759
Gene position: 4286582-4287127 (Clockwise)
Preceding gene: 121639758
Following gene: 121639762
Centisome position: 97.99
GC content: 59.71
Gene sequence:
>546_bases ATGACAGAATACGAAGGGCCTAAGACAAAATTCCACGCGTTAATGCAGGAACAGATTCATAACGAATTCACAGCGGCACA ACAATATGTCGCGATCGCGGTTTATTTCGACAGCGAAGACCTGCCGCAGTTGGCGAAGCATTTTTACAGCCAAGCGGTCG AGGAACGAAACCATGCAATGATGCTCGTGCAACACCTGCTCGACCGCGACCTTCGTGTCGAAATTCCCGGCGTAGACACG GTGCGAAACCAGTTCGACAGACCCCGCGAGGCACTGGCGCTGGCGCTCGATCAGGAACGCACAGTCACCGACCAGGTCGG TCGGCTGACAGCGGTGGCCCGCGACGAGGGCGATTTCCTCGGCGAGCAGTTCATGCAGTGGTTCTTGCAGGAACAGATCG AAGAGGTGGCCTTGATGGCAACCCTGGTGCGGGTTGCCGATCGGGCCGGGGCCAACCTGTTCGAGCTGGAGAACTTCGTC GCACGTGAAGTGGATGTGGCGCCGGCCGCATCAGGCGCCCCGCACGCTGCCGGGGGCCGCCTCTAG
Upstream 100 bases:
>100_bases CCAGGAGGTTATTATCATCCTGTGGTAACTAGGAAAGCCTTTCCTGAGTAAGTATTGCCTTCGTTGCATACCGCCCTTTA CCTGCGTTAATCTGCATTTT
Downstream 100 bases:
>100_bases ATCCCTGGCGGGGATCAGCGAGTGGTCCCGTTCGCCCGCCCGTCTTCCAGCCAGGCCTTGGTGCGGCCGGGGTGGTGAGT ACCAATCCAGGCCACCCCGA
Product: putative bacterioferritin bfrB
Products: NA
Alternate protein names: Non-heme ferritin Ftn; Nox19
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDT VRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFV AREVDVAPAASGAPHAAGGRL
Sequences:
>Translated_181_residues MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDT VRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFV AREVDVAPAASGAPHAAGGRL >Mature_180_residues TEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV RNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVA REVDVAPAASGAPHAAGGRL
Specific function: Iron-storage protein (Potential)
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BFRB_MYCTU (P96237)
Other databases:
- EMBL: AF102693 - EMBL: AE000516 - EMBL: BX842584 - PIR: F70653 - RefSeq: NP_218358.1 - RefSeq: NP_338502.1 - HSSP: P07229 - ProteinModelPortal: P96237 - SMR: P96237 - EnsemblBacteria: EBMYCT00000003392 - EnsemblBacteria: EBMYCT00000069009 - GeneID: 886176 - GeneID: 926311 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3949 - KEGG: mtu:Rv3841 - TIGR: MT3949 - TubercuList: Rv3841 - GeneTree: EBGT00050000017580 - HOGENOM: HBG750128 - OMA: KDYSAFN - ProtClustDB: CLSK872257 - GO: GO:0005829 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 - Gene3D: G3DSA:1.20.1260.10 - PANTHER: PTHR11431
Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like
EC number: NA
Molecular weight: Translated: 20442; Mature: 20311
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH MLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFL HHHHHHHCCCCEEECCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH GEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAREVDVAPAASGAPHAAGGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC L C >Mature Secondary Structure TEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH MLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFL HHHHHHHCCCCEEECCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH GEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAREVDVAPAASGAPHAAGGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036