Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639702
Identifier: 121639702
GI number: 121639702
Start: 4203723
End: 4204796
Strand: Direct
Name: 121639702
Synonym: BCG_3847
Alternate gene names: NA
Gene position: 4203723-4204796 (Clockwise)
Preceding gene: 121639701
Following gene: 121639705
Centisome position: 96.1
GC content: 67.78
Gene sequence:
>1074_bases ATGGTGACCGTAGCACGCCGACCGGTGTGCCCGGTGACGCTGACACCGGGTGACCCGGCGCTAGCGTCGGTGCGCGACCT GGTCGACGCGTGGAGCGCGCATGATGCGCTGGCGGAGCTGGTCACGATGTTCGGCGGCGCGTTTCCGCAGACGGACCATC TGGAAGCGCGGCTGGCGAGCCTGGACAAGTTCAGCACGGCATGGGACTACCGGGCGCGCGCACGTGCAGCACGAGCGCTC CACGGCGAACCGGTGCGGTGCCAGGACTCCGGCGGTGGGGCGCGATGGCTGATCCCCCGCCTGGACTTGCCGGCCAAGAA GCGGGACGCGATCGTCGGGTTGGCGCAGCAGCTGGGGCTCACCTTGGAATCGACCCCGCAGGGAACAACCTTCGACCACG TTCTAGTCATCGGCACCGGACGTCATTCCAACCTGATCCGGGCCCGCTGGGCCCGGGAATTGGCAAAGGGTCGCCAGGTT GGTCACATCGTGCTCGCCGCCGCATCGCGTCGATTGCTGCCCTCCGAGGATGACGCGGTCGCGGTCTGTGCGCCGGGCGC ACGCACCGAATTCGAGCTATTAGCGGCCGCGGCAAGGGACGCATTCGGCCTGGACGTCCACCCAGCGGTGCGGTATGTGC GCCAGCGGGACGACAACCCGCACCGGGACAGCATGGTGTGGCGCTTCGCCGCCGACACCAATGACCTAGGCGTTCCGATC ACCCTGCTGGAGGCGCCATCGCCGGAGCCCGACAGCAGCCGCGCCACCTCGGCCGACACCTTCACGTTTACCGCACACAC GCTGGGTATGCAGGACTCAACGTGTCTGTTGGTGACCGGGCAACCGTTCGTGCCCTACCAGAACTTCGACGCACTGCGAA CTCTGGCGCTGCCCTTCGGGATACAGGTGGAGACAGTGGGCTTCGGCATCGACCGCTACGACGGGCTGGGTGAGTTGGAC CAACAACACCCTGCCAAGCTGCTGCAGGAGGTCCGCTCGACGATCCGGGCGGCCCGAGCCCTGCTGGAACGGATCGAGGC CGGCGAGCGCATGGCTACCGATCCTCGGCGGTGA
Upstream 100 bases:
>100_bases GTTCCAGCGTTCTCTAATACACCCGTCGCCGCCATCGTCTGCCGGTAAAGTGGGCCGAAATGGCGCGGAACTACCAGCTG GAAGGATTACCTCCCATTCG
Downstream 100 bases:
>100_bases TGGTGCATGGCGTGGCCGGCGGGTAGCTGCCCGATACGGCTCGCAACCGTCCCGGTGGCGGCCACGGCCGTAGTCCCATG TTGGCTAGGTACCGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAARAL HGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQV GHIVLAAASRRLLPSEDDAVAVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELD QQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sequences:
>Translated_357_residues MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAARAL HGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQV GHIVLAAASRRLLPSEDDAVAVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELD QQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR >Mature_357_residues MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAARAL HGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQV GHIVLAAASRRLLPSEDDAVAVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELD QQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3785_MYCTU (P65093)
Other databases:
- EMBL: BX842584 - EMBL: AE000516 - PIR: E70696 - RefSeq: NP_218302.1 - RefSeq: NP_338444.1 - EnsemblBacteria: EBMYCT00000000425 - EnsemblBacteria: EBMYCT00000072512 - GeneID: 886119 - GeneID: 922617 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3893 - KEGG: mtu:Rv3785 - TIGR: MT3893 - TubercuList: Rv3785 - GeneTree: EBGT00050000015190 - HOGENOM: HBG569213 - OMA: AREMATG - ProtClustDB: CLSK792721 - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38932; Mature: 38932
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS CCEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV EEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEE AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI EEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEE TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG EEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCC IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR EEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS CCEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV EEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEE AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI EEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEE TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG EEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCC IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR EEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036