Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639696
Identifier: 121639696
GI number: 121639696
Start: 4197388
End: 4199388
Strand: Direct
Name: 121639696
Synonym: BCG_3841
Alternate gene names: NA
Gene position: 4197388-4199388 (Clockwise)
Preceding gene: 121639694
Following gene: 121639697
Centisome position: 95.95
GC content: 64.67
Gene sequence:
>2001_bases GTGGGCCTGTGGTTCGGTACGCTAATCGCTTTGATTTTGCTGATAGCGCCGGGGGCAATGGTTGCTCGCATCGCCCAGCT GAGGTGGCCGGTCGCCATCGCGGTTGGCCCGGCGCTGACATACGGCGTGGTGGCACTCGCGATCATCCCCTATGGCGCGC TCGGAATTCCCTGGAACGGTTGGACCGCGCTGGCCGCCTTGGCGGTGACGTGCGCTGTAGCGACCGGTTTGCAGCTACTG CTTGCCCGTTTTCGGGACCTCGACGCCGAGGCACTTGCGGTTAGCCGCTGGCCCGCGGTTACGGTCGCCGCCGGGGTGCT GCTGGGCGCCCTGTTGATCGGATGGGCCGCATATCGCGGCATACCGCACTGGCAGTCCATCCCCAGCACCTGGGACGCGG TCTGGCACGCCAACACCGTACGTTTCATCCTGGACACCGGCCAGGCGTCCTCGACTCACATGGGGGAGCTTCGCAACGTC GAGACCCATGCCCCGTTGTACTACCCGTCGGTGTTCCACGGGCTGGTCGCGGTGTTCTGCCAGTTAACCGGCGCGGCACC CACCACCGGCTACACACTGAGTTCGCTGGCCGCCTCGGTCTGGCTGTTTCCGGTCAGTGCAGCCGTTCTCACCTGGCGCG CGGTGCGCTCACACCCGGGCGCGCTGTGGTCGGCCTCCTGCGCCTCGGCAGAGTGGCGCGCCGCCGGAGCGGCGGGCACC GCCGCGGCACTCTCGGCGTCGTTCACCGCGGTGCCCTACGTCGAGTTCGATACCGCCGCTATGCCCAACCTGGCGGCCTA CGGCATCGCGGTGCCGACGATGGTGCTGATCACCTCGACATTGCGGCACCGCGACCGCATCCCGGTGGCCGTGCTAGCGC TGGTCGGCGTCTTCTCACTGCACATTACCGGCGGTATCGTCGTAGCGCTGTTGGTGTCGGCCTGGTGGCTTTTCGAGGCA CTGCGGCATCCTGTGCGATCAAGGCTGGCCGACCTGTTGACGCTGGCCGGCGTGGCAGCGATGGCCGGGTTGGTCATGTT GCCGCAGTTCTTGAGCGTCAGGCAGCAGGAAGACATCATCGCCGGACACGCTTTTCCCACCTATCTCAGCAAGAAGCGTG GGCTGTTCGACGCTGTTTTCCAGCACTCCCGCCATCTCAACGACTTCCCGGTCCAGTACGCGCTCATTGTGTTGGCCGCC ATCGGCGGGCTCATTCTGCTGGTCAAGAAGATCTGGTGGCCGCTGGCGGTTTGGCTGCTGTTGATTGTGATGAACGTCGA CGCGGGAACACCGTTGGGCGGACCTATCGGAGGGGTGGCCGGCGCACTCGGCGAGTTCTTCTATCACGATCCGCGCCGCA TCGCGGCGGCCACAACCCTGCTGTTGATGCTGATGGCAGGTGTGGCGCTGTTCGCGACAGTCATGTTGCTAGTGGCCGCG GCGAAACGACTGACCGACCGTTTCAGACCCCAGCCGGTGTCTGTCTGGGCATCGGCGACCGCGACACTACTGATCGGAGC CACTCTGGTCAGTGCGTGGCATTACTTTCCCCGGCACCGATTTCTGTTCGGCGACAAGTACGACTCGGTGATGATCGACC AGAAAGATCTCGACGCCATGGCATACCTGGCGAGTTTGCCCGGCGCACGCGACACGTTGATTGGCAACGCCAACACGGAC GGCACCGCGTGGATGTATGCCGTGGCCGGCCTACACCCGCTGTGGACCCACTACGACTACCCGCTGCAACAGGGCCCGGG CTATCACCGGTTCATCTTCTGGGCCTATGGCCGCAACGGGGAGAGCGATCCTCGGGTACTCGAGGCCATCCAAGTCCTCC GTATCCGCTATATCCTGACCAGCACTCCGACGGTGCGGGGGTTTGCCGTGCCGGACGGACTAGTGTCGTTAGAGACATCG AGGTCGTGGGCGAAGATCTACGACAACGGCGAGGCCCGAATCTACGAATGGCGCGGCACTGCCGCAGCAACACACTCCTA G
Upstream 100 bases:
>100_bases TCGTATGCCATGCCAGCCACCTTAGAACTCGGGTGTCCTAGACGTCCCAGCCCGCCCGGGCTTCCCTGAGCCATGTCACC CGGCCAGCCATACTAATCGA
Downstream 100 bases:
>100_bases AAGGTGCGTAAGAGGATGGTGATTGGATTGAGTACCGGCAGCGACGACGACGACGTCGAGGTCATCGGCGGCGTCGACCC GCGGCTGATAGCGGTGCAGG
Product: putative transmembrane protein alanine and leucine rich
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLL LARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNV ETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEA LRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAA IGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTD GTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETS RSWAKIYDNGEARIYEWRGTAAATHS
Sequences:
>Translated_666_residues MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLL LARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNV ETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEA LRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAA IGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTD GTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETS RSWAKIYDNGEARIYEWRGTAAATHS >Mature_665_residues GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLLL ARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVE THAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTA AALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEAL RHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAI GGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAA KRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDG TAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSR SWAKIYDNGEARIYEWRGTAAATHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71795; Mature: 71664
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCH WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEECHHHHHHHHHHHH QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHCCCCCCH AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL HHHHHCCCCEECEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL CCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHH AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG HHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEECCCC ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHEECCCEEEEEECCC AAATHS CCCCCC >Mature Secondary Structure GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG CCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCH WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEECHHHHHHHHHHHH QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHCCCCCCH AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL HHHHHCCCCEECEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL CCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHH AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG HHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEECCCC ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHEECCCEEEEEECCC AAATHS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA