Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639653
Identifier: 121639653
GI number: 121639653
Start: 4161267
End: 4162856
Strand: Direct
Name: 121639653
Synonym: BCG_3797
Alternate gene names: NA
Gene position: 4161267-4162856 (Clockwise)
Preceding gene: 121639652
Following gene: 121639658
Centisome position: 95.13
GC content: 68.81
Gene sequence:
>1590_bases ATGGATCAAGATCGATCGGACAACACGGCATTGCGCCGTGGTCTGCGAATTGCCCTGCGCGGGCGCCGCGATCCGCTGCC CGTGGCGGGCCGGCGGAGCCGGACCTCCGGCGGAATCGGTGACCTGCACACCCGGAAGGTGCTTGACCTGACCATCCGGC TCGCCGAGGTGATGTTGTCGTCCGGCTCTGGCACCGCGGATGTCGTCGCCACAGCCCAGGACGTGGCTCAGGCCTACCAG CTCACCGATTGCGTTGTCGACATCACCGTTACCACCATCATCGTGTCCGCGCTAGCGACCACAGACACTCCGCCGGTCAC CATCATGCGGTCGGTCCGGACCCGGTCCACTGACTACAGCCGGCTGGCCGAACTCGATCGACTCGTTCAGCGGATAACCT CCGGTGGCGTCGCAGTCGACCAGGCTCACGAGGCTATGGACGAGTTGACCGAACGGCCCCACCCCTACCCGCGCTGGCTC GCGACCGCGGGGGCGGCGGGCTTCGCACTCGGCGTCGCCATGTTGCTCGGCGGAACCTGGCTGACCTGCGTCTTGGCTGC CGTGACGTCTGGCGTGATCGACCGACTGGGCCGGCTGCTGAACCGGATCGGGACCCCGTTGTTCTTCCAGCGCGTGTTCG GCGCGGGGATCGCGACCCTGGTCGCGGTGGCGGCTTACCTGATCGCCGGCCAGGATCCGACCGCGCTGGTGGCCACCGGA ATCGTTGTGCTGCTGTCTGGGATGACCTTGGTGGGTTCGATGCAGGACGCGGTCACCGGGTACATGCTCACCGCACTCGC CCGGCTTGGCGACGCCCTGTTCCTGACCGCAGGGATCGTCGTCGGCATCCTCATCTCGTTGCGGGGCGTCACCAATGCCG GCATCCAGATCGAACTGCATGTCGACGCAACCACGACGCTCGCCACCCCGGGCATGCCGCTACCGATTCTCGTCGCGGTA AGCGGTGCGGCGCTGTCCGGCGTGTGCCTGACGATCGCGAGCTATGCGCCGCTACGTTCTGTGGCCACCGCCGGACTCTC GGCCGGACTCGCCGAACTGGTGCTCATCGGACTCGGCGCGGCCGGGTTCGGCCGAGTGGTCGCCACCTGGACCGCCGCGA TCGGCGTCGGCTTCTTGGCCACCCTGATCTCAATCCGTCGGCAGGCTCCCGCCTTGGTGACGGCCACCGCCGGCATCATG CCGATGCTGCCGGGCCTTGCGGTCTTCCGTGCCGTGTTCGCGTTCGCCGTCAATGACACACCCGACGGCGGTCTGACCCA GCTGCTGGAAGCGGCCGCGACTGCACTCGCGCTTGGCAGCGGGGTGGTGTTGGGCGAGTTCCTCGCCTCACCATTGCGGT ACGGCGCCGGCCGGATCGGCGACCTCTTTCGGATCGAGGGTCCACCCGGGCTCCGGCGGGCGGTCGGCCGTGTGGTGCGC CTACAGCCGGCCAAGAGCCAGCAGCCGACCGGCACCGGTGGCCAACGGTGGCGAAGCGTCGCGCTGGAGCCGACGACGGC CGACGACGTGGACGCCGGCTATCGCGGCGATTGGCCCGCTACCTGCACCAGCGCGACCGAGGTGCGCTAG
Upstream 100 bases:
>100_bases GGCCGCCTACCGCAACCAGGCCAGGTTACAGACAACCGTGAGCGCACCTGGCAGCGGGCGTGGTCCGAATCCAGGTAACG TCTCAGTATCCTGCTGACCG
Downstream 100 bases:
>100_bases CCAGCCTCGCCAGCGCCGACCAACTGCTCCCAGCTAGCGGGCACCATCGGCACCGACGGACTACCCCCGAACTCACCACC GGCCAACGTGGTCAACCCCG
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein; Threonine Export Protein; Membrane Spanning Protein
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MDQDRSDNTALRRGLRIALRGRRDPLPVAGRRSRTSGGIGDLHTRKVLDLTIRLAEVMLSSGSGTADVVATAQDVAQAYQ LTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSRLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWL ATAGAAGFALGVAMLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAVAAYLIAGQDPTALVATG IVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVGILISLRGVTNAGIQIELHVDATTTLATPGMPLPILVAV SGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIM PMLPGLAVFRAVFAFAVNDTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGPPGLRRAVGRVVR LQPAKSQQPTGTGGQRWRSVALEPTTADDVDAGYRGDWPATCTSATEVR
Sequences:
>Translated_529_residues MDQDRSDNTALRRGLRIALRGRRDPLPVAGRRSRTSGGIGDLHTRKVLDLTIRLAEVMLSSGSGTADVVATAQDVAQAYQ LTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSRLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWL ATAGAAGFALGVAMLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAVAAYLIAGQDPTALVATG IVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVGILISLRGVTNAGIQIELHVDATTTLATPGMPLPILVAV SGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIM PMLPGLAVFRAVFAFAVNDTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGPPGLRRAVGRVVR LQPAKSQQPTGTGGQRWRSVALEPTTADDVDAGYRGDWPATCTSATEVR >Mature_529_residues MDQDRSDNTALRRGLRIALRGRRDPLPVAGRRSRTSGGIGDLHTRKVLDLTIRLAEVMLSSGSGTADVVATAQDVAQAYQ LTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSRLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWL ATAGAAGFALGVAMLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAVAAYLIAGQDPTALVATG IVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVGILISLRGVTNAGIQIELHVDATTTLATPGMPLPILVAV SGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIM PMLPGLAVFRAVFAFAVNDTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGPPGLRRAVGRVVR LQPAKSQQPTGTGGQRWRSVALEPTTADDVDAGYRGDWPATCTSATEVR
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54718; Mature: 54718
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQDRSDNTALRRGLRIALRGRRDPLPVAGRRSRTSGGIGDLHTRKVLDLTIRLAEVMLS CCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SGSGTADVVATAQDVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH RLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALGVAMLLGGTW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH LTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAVAAYLIAGQDPTALVATG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVGILISLRGVTNAGIQIELH HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VDATTTLATPGMPLPILVAVSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGA ECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIMPMLPGLAVFRAVFAFAVNDT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC PDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGPPGLRRAVGRVVR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHE LQPAKSQQPTGTGGQRWRSVALEPTTADDVDAGYRGDWPATCTSATEVR ECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDQDRSDNTALRRGLRIALRGRRDPLPVAGRRSRTSGGIGDLHTRKVLDLTIRLAEVMLS CCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SGSGTADVVATAQDVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH RLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALGVAMLLGGTW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH LTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLVAVAAYLIAGQDPTALVATG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVGILISLRGVTNAGIQIELH HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VDATTTLATPGMPLPILVAVSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGA ECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIMPMLPGLAVFRAVFAFAVNDT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC PDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGPPGLRRAVGRVVR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHE LQPAKSQQPTGTGGQRWRSVALEPTTADDVDAGYRGDWPATCTSATEVR ECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA