Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is bdhA [H]
Identifier: 121639642
GI number: 121639642
Start: 4144989
End: 4146182
Strand: Direct
Name: bdhA [H]
Synonym: BCG_3786
Alternate gene names: 121639642
Gene position: 4144989-4146182 (Clockwise)
Preceding gene: 121639641
Following gene: 121639643
Centisome position: 94.75
GC content: 65.33
Gene sequence:
>1194_bases ATGAAGGCGGTGACCTGCACCAACGCAAAGCTCGAGGTAGTCGACCGGCCGTCCCCGGCGCCGGCCAAGGGTCAACTGTT GCTCGATGTGCTGCGGTGCGGTATCTGCGGATCGGACCTGCATGCCCGCTTGCACTGTGATGAACTGGCCGACGTGATGG CCGAATCTGGCTACCACGCCTTCATGCGATCGAATCAGCAGGTGGTGTTCGGACACGAGTTCTGTGGCGAGGTGGTCGAT TACGGTCCCGGCACCCGCAGGACCCCTAGGCGCGGCACCCCGGTCGTCGCCATGCCGCTGCTGCGGCGTGGCAACAAAGA GGTGCACGGGATCGGGCTTTCGACAATGGCGCCGGGCGCCTACGCCGAGCGGCTCGTCGTCGAGCAGTCGCTGACGTTTC CTGTCCCGAACGGGCTGGCGCCCGAGATAGCCGCGCTGACCGAGCCCATGGCCGTCGGATGGCACGCCGTCCGGCGCGGC GAGGTGGGCAAGGGCGACGTCGCGATCGTGATCGGGTGCGGTCCGATCGGCCTCGCGGTGATCTGCATGCTGAAGTCGCG CGGGGTACACACGGTGATCGCAAGCGACTTTTCACCCGGCCGTCGTGCCCTCGCAACCGCCTGTGGCGCTGATTCCGTAG TCGATCCCGTACAGGACTCACCGTATGCGGTAGCCGCCGGCCTTGGACAGGGAAACAGACACCTGCAAAGCATCCTCGAC GCGTTCGACCTCGCAGTCGGCACGGTCGAAAGCCTGCAGCGGCTGCGGCTGCCGTGGTGGCACCTTTGGCGGGCTGCCGA AGCAGCTGGCGCCGCAACGCCAAAGCGTCCAGTCATCTTCGAATGTGTTGGCGTTCCGGGAATTATCGATGGCATCATCG CCAGCGCACCGCTGTTCTCGCGCGTCGTCGTGGTCGGCGTCTGCATGGGCTCAGACCACATCCGGCCGGCGATGGCGATC AACAAAGAGATCAACCTGCGGTTCGTCCTCGGCTACACACCGTTAGAGTTCCGCGACACGTTGCACATGCTGGCCGACGG CAAGGTCAACGCCGCGCCGCTGATCACCGGGACGGTCGGTTTACCCGGCGTGGCGGCAGCATTCGATGCGCTCGGCGATC CCGAGGCGCACGCAAAAATCATGATCGACCCCAAGAGCAACGCCGCGAGTCCCCAACCATTCCGCGTGGAGTGA
Upstream 100 bases:
>100_bases CCAGCGTCACCACAATAGCGGTGGCCACGTAGTCCATGGTGACAGCCCCGCCACGGCGCACGTTCAGGCCGCTTGCTGTC GGATCGAGAGGACCTACGCG
Downstream 100 bases:
>100_bases ATGATGCGGGATAGCCGCACGGCGTTGGATCCACCCGGGACGACAGCTTGAATTCAGGCGGCCTCTGCTTTAAAGCGCAC ACTACCGCGCCTGCTGCGGC
Product: putative dehydrogenase
Products: NA
Alternate protein names: Acetoin reductase/2,3-butanediol dehydrogenase; AR/BDH [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKAVTCTNAKLEVVDRPSPAPAKGQLLLDVLRCGICGSDLHARLHCDELADVMAESGYHAFMRSNQQVVFGHEFCGEVVD YGPGTRRTPRRGTPVVAMPLLRRGNKEVHGIGLSTMAPGAYAERLVVEQSLTFPVPNGLAPEIAALTEPMAVGWHAVRRG EVGKGDVAIVIGCGPIGLAVICMLKSRGVHTVIASDFSPGRRALATACGADSVVDPVQDSPYAVAAGLGQGNRHLQSILD AFDLAVGTVESLQRLRLPWWHLWRAAEAAGAATPKRPVIFECVGVPGIIDGIIASAPLFSRVVVVGVCMGSDHIRPAMAI NKEINLRFVLGYTPLEFRDTLHMLADGKVNAAPLITGTVGLPGVAAAFDALGDPEAHAKIMIDPKSNAASPQPFRVE
Sequences:
>Translated_397_residues MKAVTCTNAKLEVVDRPSPAPAKGQLLLDVLRCGICGSDLHARLHCDELADVMAESGYHAFMRSNQQVVFGHEFCGEVVD YGPGTRRTPRRGTPVVAMPLLRRGNKEVHGIGLSTMAPGAYAERLVVEQSLTFPVPNGLAPEIAALTEPMAVGWHAVRRG EVGKGDVAIVIGCGPIGLAVICMLKSRGVHTVIASDFSPGRRALATACGADSVVDPVQDSPYAVAAGLGQGNRHLQSILD AFDLAVGTVESLQRLRLPWWHLWRAAEAAGAATPKRPVIFECVGVPGIIDGIIASAPLFSRVVVVGVCMGSDHIRPAMAI NKEINLRFVLGYTPLEFRDTLHMLADGKVNAAPLITGTVGLPGVAAAFDALGDPEAHAKIMIDPKSNAASPQPFRVE >Mature_397_residues MKAVTCTNAKLEVVDRPSPAPAKGQLLLDVLRCGICGSDLHARLHCDELADVMAESGYHAFMRSNQQVVFGHEFCGEVVD YGPGTRRTPRRGTPVVAMPLLRRGNKEVHGIGLSTMAPGAYAERLVVEQSLTFPVPNGLAPEIAALTEPMAVGWHAVRRG EVGKGDVAIVIGCGPIGLAVICMLKSRGVHTVIASDFSPGRRALATACGADSVVDPVQDSPYAVAAGLGQGNRHLQSILD AFDLAVGTVESLQRLRLPWWHLWRAAEAAGAATPKRPVIFECVGVPGIIDGIIASAPLFSRVVVVGVCMGSDHIRPAMAI NKEINLRFVLGYTPLEFRDTLHMLADGKVNAAPLITGTVGLPGVAAAFDALGDPEAHAKIMIDPKSNAASPQPFRVE
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=372, Percent_Identity=25, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI226510992, Length=216, Percent_Identity=31.9444444444444, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787863, Length=220, Percent_Identity=28.6363636363636, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87082125, Length=219, Percent_Identity=27.3972602739726, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788073, Length=234, Percent_Identity=27.3504273504274, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790045, Length=240, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562876, Length=374, Percent_Identity=25.4010695187166, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17562878, Length=216, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319257, Length=405, Percent_Identity=26.4197530864197, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319258, Length=258, Percent_Identity=29.4573643410853, Blast_Score=93, Evalue=8e-20, Organism=Drosophila melanogaster, GI17737897, Length=371, Percent_Identity=23.989218328841, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI17137530, Length=369, Percent_Identity=22.4932249322493, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.4 [H]
Molecular weight: Translated: 41967; Mature: 41967
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVTCTNAKLEVVDRPSPAPAKGQLLLDVLRCGICGSDLHARLHCDELADVMAESGYHA CCCEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHCCCHH FMRSNQQVVFGHEFCGEVVDYGPGTRRTPRRGTPVVAMPLLRRGNKEVHGIGLSTMAPGA HHCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHCCCCCEEEECCHHCCCCH YAERLVVEQSLTFPVPNGLAPEIAALTEPMAVGWHAVRRGEVGKGDVAIVIGCGPIGLAV HHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH ICMLKSRGVHTVIASDFSPGRRALATACGADSVVDPVQDSPYAVAAGLGQGNRHLQSILD HHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH AFDLAVGTVESLQRLRLPWWHLWRAAEAAGAATPKRPVIFECVGVPGIIDGIIASAPLFS HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHH RVVVVGVCMGSDHIRPAMAINKEINLRFVLGYTPLEFRDTLHMLADGKVNAAPLITGTVG HHHHEEEEECCCCCCCHHEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC LPGVAAAFDALGDPEAHAKIMIDPKSNAASPQPFRVE CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKAVTCTNAKLEVVDRPSPAPAKGQLLLDVLRCGICGSDLHARLHCDELADVMAESGYHA CCCEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHEECHHHHHHHHHHCCCHH FMRSNQQVVFGHEFCGEVVDYGPGTRRTPRRGTPVVAMPLLRRGNKEVHGIGLSTMAPGA HHCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHCCCCCEEEECCHHCCCCH YAERLVVEQSLTFPVPNGLAPEIAALTEPMAVGWHAVRRGEVGKGDVAIVIGCGPIGLAV HHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH ICMLKSRGVHTVIASDFSPGRRALATACGADSVVDPVQDSPYAVAAGLGQGNRHLQSILD HHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH AFDLAVGTVESLQRLRLPWWHLWRAAEAAGAATPKRPVIFECVGVPGIIDGIIASAPLFS HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHH RVVVVGVCMGSDHIRPAMAINKEINLRFVLGYTPLEFRDTLHMLADGKVNAAPLITGTVG HHHHEEEEECCCCCCCHHEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC LPGVAAAFDALGDPEAHAKIMIDPKSNAASPQPFRVE CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]