Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is fdxB [H]
Identifier: 121639473
GI number: 121639473
Start: 3971577
End: 3973634
Strand: Direct
Name: fdxB [H]
Synonym: BCG_3618
Alternate gene names: 121639473
Gene position: 3971577-3973634 (Clockwise)
Preceding gene: 121639472
Following gene: 121639477
Centisome position: 90.79
GC content: 66.28
Gene sequence:
>2058_bases GTGACTGACGCGTGTCAAGCAGAGTACGCTATCGCAGCTATGTCGACCGTCGAGATGGACCAGGCGGCTCCAGAGTCCGC CGCGCACCACCCTCTGCCGGACCCCGGTGAGTCGGTCCCCAGACTCGCGCTGCCCACGATCGGGATCTTCCTGGCCACGC TCACCGCGTTCGTCGGTTCTACGACCGCTTACATCAGCGGATGGATCCCGTTCTGGGTGACGATCCCCGTCAACGCCGCG GTCACGTTCGTGATGTTCACCGTCGTGCATGACGCATCGCATTACGCGATCAGCTCCATCCGGTGGGTGAACGGGCTGTT CGGGCGGCTGGCGTGGCTTTTCGTCGGGCCGGTGGTCGCGTTCCCGGCCTTCGGGTACATCCACATCCAGCACCACCGCC ATTCCAACGACGACGAGCAAGACCCGGACACCTTCGCCTCACACGGCTCGCTGTGGGTGCTGCCGTTGCGCTGGTCGATG GTCGAGTACTTCTACATCAAGTACTACCTGCCTCGCGGCCGCAGCCGGCCGGTCATCGAGGTCGCCGAGACGCTGGTGAT GATGACCCTGTTCCTGACCGGCCTGATCGTCGCCATCGTCACCGGCAACTTCTGGACGCTGGCGATCGTCTTCCTGATCC CGCAACGTATCGGCCTTACCGTGCTGGCCTGGTGGTTCGACTGGCTGCCCCACCACGGTCTGGAGGACACCCAGCGCAGC AACCGCTACCGCGCGACCCGCAACCGGGTTGGCGCCGAGTGGCTGTTCACCCCGGTGCTGCTGTCGCAGAACTACCACTT GGTGCACCACCTGCACCCGTCGGTGCCGTTCTACCGGTACCTGCGCACCTGGCGGCGCAACGAGGAGGCGTATCTGGAAC GCAACGCCGCGATCTCCACGGTCTTTGGCCAGCAACTGAATCCGGACGAGTACCGGCAGTGGAAGGAGCTCAACGGCCGG CTCGCGCGACTGCTGCCGGTGCGGATGCCGGCCCGCTCCAGCTCGCCGCACGCGGTGCTGCACCGCATCCCGGTCGCGTC GGTGGATCCCATCACCGCCGATGCCACCCTGGTGACTTTCGCGGTGCCGGAAGCATTGCGGGACGCGTTCCGATTCGAGC CGGGCCAGCACGTGACGGTGCGCACCGACCTGGGCGGCCAAGGCATCCGGCGCAACTACTCGATCTGCGCCCCGGCCACC CGCGCCCAGCTGCGCATCGCCGTCAAACACATTCCCGGCGGGGCGTTTTCGACGTTCGTGGCCAACGAACTGAAGGCCGG CGACGTGCTCGAGCTGATGACACCGACCGGCCGGTTCGGCACCCCGCTGGATCCGTTGCACCGCAAGCACTATGTGGGCC TGGTGGCCGGCAGCGGGATCACCCCGGTGCTGTCCATCCTGGCGACCACGCTGGAGATCGAGACCGAAAGCCGATTCACG CTGATCTACGGCAACCGCACCAAGGAATCGACGATGTTTCGGGCCGAGCTGGATCGTCTGGAGTCGCGCTATGCCGACCG GCTGGAAATCCTGCACGTGCTCTCCAGCGAGCCGCTGCACACCCCGGAGCTGCGCGGGCGCATCGACCGAGACAAACTCA CCAGGTGGCTGACGAGTACCCTGCGGCCGGCCGGTGTGGACGAATGGTTCATCTGCGGCCCGCTCGCCATGGCCACCGCG GTGCGCGAGACCCTGATCGAGCACGGCGTGGACTCCGAGCGCATTCACCTGGAGTTGTTCTACGGGTTCGACACGCCCCC GGCGACCCGTCCCTCCTATGCGGGAGCCACCGTCACCTTCACGCTGTCCGGGCAGCGGGCGATATTCGATCTGGTGCCCG GCGACTCGATTCTGGAAGGGGCGCTGGGGCTGCGCAGCGATGCGCCGTATGCGTGCATGGGCGGCGCATGCGGCACCTGC CGAGCCAAACTGATCGAGGGCAACGTCGAGATGGACCACAACTTCGCCCTCCGGAAGGCGGAGCTGGATGCCGGCTACAT CCTGACCTGCCAGTCACACCCGACGACACCATTCGTCGCCGTCGACTACGACGCCTAG
Upstream 100 bases:
>100_bases TAGCGGGCATTCTTGACGACCTACCGTCGTGCAAAGAGCTGATCGAGTCGATCGTGCTTGACGCCATCACACATTTACAA ACCGCATCTGCGCTGGTGGA
Downstream 100 bases:
>100_bases GTTCGTGGCGCCGCCCCATACTTGCGCCGACTGTGAATCTGACGACGCGACACGCCGATTCGCCGTCGTGTGGTTCACTC TCGGCGCTCATGGGCGCCAT
Product: putative electron transfer protein fdxB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MTDACQAEYAIAAMSTVEMDQAAPESAAHHPLPDPGESVPRLALPTIGIFLATLTAFVGSTTAYISGWIPFWVTIPVNAA VTFVMFTVVHDASHYAISSIRWVNGLFGRLAWLFVGPVVAFPAFGYIHIQHHRHSNDDEQDPDTFASHGSLWVLPLRWSM VEYFYIKYYLPRGRSRPVIEVAETLVMMTLFLTGLIVAIVTGNFWTLAIVFLIPQRIGLTVLAWWFDWLPHHGLEDTQRS NRYRATRNRVGAEWLFTPVLLSQNYHLVHHLHPSVPFYRYLRTWRRNEEAYLERNAAISTVFGQQLNPDEYRQWKELNGR LARLLPVRMPARSSSPHAVLHRIPVASVDPITADATLVTFAVPEALRDAFRFEPGQHVTVRTDLGGQGIRRNYSICAPAT RAQLRIAVKHIPGGAFSTFVANELKAGDVLELMTPTGRFGTPLDPLHRKHYVGLVAGSGITPVLSILATTLEIETESRFT LIYGNRTKESTMFRAELDRLESRYADRLEILHVLSSEPLHTPELRGRIDRDKLTRWLTSTLRPAGVDEWFICGPLAMATA VRETLIEHGVDSERIHLELFYGFDTPPATRPSYAGATVTFTLSGQRAIFDLVPGDSILEGALGLRSDAPYACMGGACGTC RAKLIEGNVEMDHNFALRKAELDAGYILTCQSHPTTPFVAVDYDA
Sequences:
>Translated_685_residues MTDACQAEYAIAAMSTVEMDQAAPESAAHHPLPDPGESVPRLALPTIGIFLATLTAFVGSTTAYISGWIPFWVTIPVNAA VTFVMFTVVHDASHYAISSIRWVNGLFGRLAWLFVGPVVAFPAFGYIHIQHHRHSNDDEQDPDTFASHGSLWVLPLRWSM VEYFYIKYYLPRGRSRPVIEVAETLVMMTLFLTGLIVAIVTGNFWTLAIVFLIPQRIGLTVLAWWFDWLPHHGLEDTQRS NRYRATRNRVGAEWLFTPVLLSQNYHLVHHLHPSVPFYRYLRTWRRNEEAYLERNAAISTVFGQQLNPDEYRQWKELNGR LARLLPVRMPARSSSPHAVLHRIPVASVDPITADATLVTFAVPEALRDAFRFEPGQHVTVRTDLGGQGIRRNYSICAPAT RAQLRIAVKHIPGGAFSTFVANELKAGDVLELMTPTGRFGTPLDPLHRKHYVGLVAGSGITPVLSILATTLEIETESRFT LIYGNRTKESTMFRAELDRLESRYADRLEILHVLSSEPLHTPELRGRIDRDKLTRWLTSTLRPAGVDEWFICGPLAMATA VRETLIEHGVDSERIHLELFYGFDTPPATRPSYAGATVTFTLSGQRAIFDLVPGDSILEGALGLRSDAPYACMGGACGTC RAKLIEGNVEMDHNFALRKAELDAGYILTCQSHPTTPFVAVDYDA >Mature_684_residues TDACQAEYAIAAMSTVEMDQAAPESAAHHPLPDPGESVPRLALPTIGIFLATLTAFVGSTTAYISGWIPFWVTIPVNAAV TFVMFTVVHDASHYAISSIRWVNGLFGRLAWLFVGPVVAFPAFGYIHIQHHRHSNDDEQDPDTFASHGSLWVLPLRWSMV EYFYIKYYLPRGRSRPVIEVAETLVMMTLFLTGLIVAIVTGNFWTLAIVFLIPQRIGLTVLAWWFDWLPHHGLEDTQRSN RYRATRNRVGAEWLFTPVLLSQNYHLVHHLHPSVPFYRYLRTWRRNEEAYLERNAAISTVFGQQLNPDEYRQWKELNGRL ARLLPVRMPARSSSPHAVLHRIPVASVDPITADATLVTFAVPEALRDAFRFEPGQHVTVRTDLGGQGIRRNYSICAPATR AQLRIAVKHIPGGAFSTFVANELKAGDVLELMTPTGRFGTPLDPLHRKHYVGLVAGSGITPVLSILATTLEIETESRFTL IYGNRTKESTMFRAELDRLESRYADRLEILHVLSSEPLHTPELRGRIDRDKLTRWLTSTLRPAGVDEWFICGPLAMATAV RETLIEHGVDSERIHLELFYGFDTPPATRPSYAGATVTFTLSGQRAIFDLVPGDSILEGALGLRSDAPYACMGGACGTCR AKLIEGNVEMDHNFALRKAELDAGYILTCQSHPTTPFVAVDYDA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=353, Percent_Identity=43.0594900849858, Blast_Score=279, Evalue=5e-76, Organism=Escherichia coli, GI1787098, Length=317, Percent_Identity=23.6593059936909, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1788104, Length=320, Percent_Identity=26.875, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322146, Length=255, Percent_Identity=25.0980392156863, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323510, Length=234, Percent_Identity=29.0598290598291, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321673, Length=243, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 76567; Mature: 76435
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDACQAEYAIAAMSTVEMDQAAPESAAHHPLPDPGESVPRLALPTIGIFLATLTAFVGS CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC TTAYISGWIPFWVTIPVNAAVTFVMFTVVHDASHYAISSIRWVNGLFGRLAWLFVGPVVA CHHEEECCEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAFGYIHIQHHRHSNDDEQDPDTFASHGSLWVLPLRWSMVEYFYIKYYLPRGRSRPVIE HCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHEEEEEEECCCCCCCCHHH VAETLVMMTLFLTGLIVAIVTGNFWTLAIVFLIPQRIGLTVLAWWFDWLPHHGLEDTQRS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC NRYRATRNRVGAEWLFTPVLLSQNYHLVHHLHPSVPFYRYLRTWRRNEEAYLERNAAIST CCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCHHHH VFGQQLNPDEYRQWKELNGRLARLLPVRMPARSSSPHAVLHRIPVASVDPITADATLVTF HHCCCCCHHHHHHHHHHCCCEEHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE AVPEALRDAFRFEPGQHVTVRTDLGGQGIRRNYSICAPATRAQLRIAVKHIPGGAFSTFV CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCHHHHHH ANELKAGDVLELMTPTGRFGTPLDPLHRKHYVGLVAGSGITPVLSILATTLEIETESRFT HHHCCCCCEEEEECCCCCCCCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHEEECCCCEE LIYGNRTKESTMFRAELDRLESRYADRLEILHVLSSEPLHTPELRGRIDRDKLTRWLTST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHH LRPAGVDEWFICGPLAMATAVRETLIEHGVDSERIHLELFYGFDTPPATRPSYAGATVTF CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEE TLSGQRAIFDLVPGDSILEGALGLRSDAPYACMGGACGTCRAKLIEGNVEMDHNFALRKA EECCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCEECCCEEEEEE ELDAGYILTCQSHPTTPFVAVDYDA ECCCCEEEEECCCCCCCEEEEECCC >Mature Secondary Structure TDACQAEYAIAAMSTVEMDQAAPESAAHHPLPDPGESVPRLALPTIGIFLATLTAFVGS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC TTAYISGWIPFWVTIPVNAAVTFVMFTVVHDASHYAISSIRWVNGLFGRLAWLFVGPVVA CHHEEECCEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAFGYIHIQHHRHSNDDEQDPDTFASHGSLWVLPLRWSMVEYFYIKYYLPRGRSRPVIE HCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHEEEEEEECCCCCCCCHHH VAETLVMMTLFLTGLIVAIVTGNFWTLAIVFLIPQRIGLTVLAWWFDWLPHHGLEDTQRS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC NRYRATRNRVGAEWLFTPVLLSQNYHLVHHLHPSVPFYRYLRTWRRNEEAYLERNAAIST CCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCHHHH VFGQQLNPDEYRQWKELNGRLARLLPVRMPARSSSPHAVLHRIPVASVDPITADATLVTF HHCCCCCHHHHHHHHHHCCCEEHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEE AVPEALRDAFRFEPGQHVTVRTDLGGQGIRRNYSICAPATRAQLRIAVKHIPGGAFSTFV CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCHHHHHH ANELKAGDVLELMTPTGRFGTPLDPLHRKHYVGLVAGSGITPVLSILATTLEIETESRFT HHHCCCCCEEEEECCCCCCCCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHEEECCCCEE LIYGNRTKESTMFRAELDRLESRYADRLEILHVLSSEPLHTPELRGRIDRDKLTRWLTST EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHH LRPAGVDEWFICGPLAMATAVRETLIEHGVDSERIHLELFYGFDTPPATRPSYAGATVTF CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEE TLSGQRAIFDLVPGDSILEGALGLRSDAPYACMGGACGTCRAKLIEGNVEMDHNFALRKA EECCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCEECCCEEEEEE ELDAGYILTCQSHPTTPFVAVDYDA ECCCCEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]