Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639398
Identifier: 121639398
GI number: 121639398
Start: 3877335
End: 3878381
Strand: Direct
Name: 121639398
Synonym: BCG_3543
Alternate gene names: NA
Gene position: 3877335-3878381 (Clockwise)
Preceding gene: 121639397
Following gene: 121639403
Centisome position: 88.63
GC content: 64.66
Gene sequence:
>1047_bases ATGTGGGGCCGACTCGACGGAGCGGGATGGCTCGTCCACGTGCTGCTAGACCCGCGCCGGGTGCGCTGGATCGTCGGGGA GCGCGCCGATACCAACGGGCCGCAGAGCGGTGCACAATGGTTCCTAGGCAAACTCAAAGAACTTGGGGCACCTGACTTTC CGAGTCCGGGCTACCCGCTGCCGGCGGTCGGCGGCGGGCCGGCCCAACATCTGACCGAGGACATGCTGCTCGATGAGCTT GGCTTCCTGGACGACCCAGCAAAGCCGCTGCCGGCCAGCATTCCGTGGACCGCGCTGTGGTTGTCGCAGGCGTGGCAACA ACGAGTCCTCGAAGAGGAATTGGACGGACTGGCCAACACGGTGCTCGACCCACAGCCCGGAAAATTGCCGGACTGGAGCC CGACGAGTTCACGAACATGGGCGACCAAGGTATTGGCCGCTCACCCTGGCGACGCCAAATATGCTCTGCTGAACGAAAAT CCAATCGCAGGCGAAACATTCGCCAGCGACAAGGGCTCACCACTGATGGCGCACACGGTCGCCAAAGCCGCCGCGACTGC GGCCGGAGCGGCCGGCTCGGTCCGGCAGCTGCCCAGTGTATTGAAGCCACCACTGATCACGTTGCGGACACTCACCCTCA GTGGATACCGAGTGGTCTCGTTGACCAAAGGCATTGCCAGATCGACCATTATCGCCGGCGCGCTGCTACTTGTGCTCGGC GTCGCGGCGGCGATCCAGTCGGTGACCGTGTTCGGAGTCACTGGCCTGATCGCGGCCGGGACTGGGGGCTTGCTGGTCGT CCTAGGCACTTGGCAGGTCTCCGGCAGGCTCCTTTTTGCACTGCTGTCTTTCTCGGTTGTCGGCGCGGTACTCGCGTTGG CGACGCCCGTCGTACGCGAATGGCTGTTCGGCACCCAGCAGCAGCCCGGCTGGGTAGGCACTCACGCGTATTGGCTTGGC GCCCAATGGTGGCACCCCCTGGTCGTCGTCGGGCTCATCGCACTGGTGGCCATCATGATCGCAGCGGCCAACCCAGGACG ACGGTGA
Upstream 100 bases:
>100_bases TCAGCCGAACTCACCGTCGGTGGTGACGCCGACAAGGTGTGCCGGCAGCTTGCATCATTTCGGTGCGTTCTACAAGAGGT CATGGCGAGCCAATGACTGG
Downstream 100 bases:
>100_bases CGATGCGTGCGGTGATCCGGAATTCAGGAACCGAGGCCCGCGGCGCCGTCAGCCGCCGCCAACTGATCGAGCGCTTCGCC GGTGTAGACGGCGAGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MWGRLDGAGWLVHVLLDPRRVRWIVGERADTNGPQSGAQWFLGKLKELGAPDFPSPGYPLPAVGGGPAQHLTEDMLLDEL GFLDDPAKPLPASIPWTALWLSQAWQQRVLEEELDGLANTVLDPQPGKLPDWSPTSSRTWATKVLAAHPGDAKYALLNEN PIAGETFASDKGSPLMAHTVAKAAATAAGAAGSVRQLPSVLKPPLITLRTLTLSGYRVVSLTKGIARSTIIAGALLLVLG VAAAIQSVTVFGVTGLIAAGTGGLLVVLGTWQVSGRLLFALLSFSVVGAVLALATPVVREWLFGTQQQPGWVGTHAYWLG AQWWHPLVVVGLIALVAIMIAAANPGRR
Sequences:
>Translated_348_residues MWGRLDGAGWLVHVLLDPRRVRWIVGERADTNGPQSGAQWFLGKLKELGAPDFPSPGYPLPAVGGGPAQHLTEDMLLDEL GFLDDPAKPLPASIPWTALWLSQAWQQRVLEEELDGLANTVLDPQPGKLPDWSPTSSRTWATKVLAAHPGDAKYALLNEN PIAGETFASDKGSPLMAHTVAKAAATAAGAAGSVRQLPSVLKPPLITLRTLTLSGYRVVSLTKGIARSTIIAGALLLVLG VAAAIQSVTVFGVTGLIAAGTGGLLVVLGTWQVSGRLLFALLSFSVVGAVLALATPVVREWLFGTQQQPGWVGTHAYWLG AQWWHPLVVVGLIALVAIMIAAANPGRR >Mature_348_residues MWGRLDGAGWLVHVLLDPRRVRWIVGERADTNGPQSGAQWFLGKLKELGAPDFPSPGYPLPAVGGGPAQHLTEDMLLDEL GFLDDPAKPLPASIPWTALWLSQAWQQRVLEEELDGLANTVLDPQPGKLPDWSPTSSRTWATKVLAAHPGDAKYALLNEN PIAGETFASDKGSPLMAHTVAKAAATAAGAAGSVRQLPSVLKPPLITLRTLTLSGYRVVSLTKGIARSTIIAGALLLVLG VAAAIQSVTVFGVTGLIAAGTGGLLVVLGTWQVSGRLLFALLSFSVVGAVLALATPVVREWLFGTQQQPGWVGTHAYWLG AQWWHPLVVVGLIALVAIMIAAANPGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36722; Mature: 36722
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGRLDGAGWLVHVLLDPRRVRWIVGERADTNGPQSGAQWFLGKLKELGAPDFPSPGYPL CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PAVGGGPAQHLTEDMLLDELGFLDDPAKPLPASIPWTALWLSQAWQQRVLEEELDGLANT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLDPQPGKLPDWSPTSSRTWATKVLAAHPGDAKYALLNENPIAGETFASDKGSPLMAHTV CCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH AKAAATAAGAAGSVRQLPSVLKPPLITLRTLTLSGYRVVSLTKGIARSTIIAGALLLVLG HHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHH VAAAIQSVTVFGVTGLIAAGTGGLLVVLGTWQVSGRLLFALLSFSVVGAVLALATPVVRE HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLFGTQQQPGWVGTHAYWLGAQWWHPLVVVGLIALVAIMIAAANPGRR HHHCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MWGRLDGAGWLVHVLLDPRRVRWIVGERADTNGPQSGAQWFLGKLKELGAPDFPSPGYPL CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PAVGGGPAQHLTEDMLLDELGFLDDPAKPLPASIPWTALWLSQAWQQRVLEEELDGLANT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLDPQPGKLPDWSPTSSRTWATKVLAAHPGDAKYALLNENPIAGETFASDKGSPLMAHTV CCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH AKAAATAAGAAGSVRQLPSVLKPPLITLRTLTLSGYRVVSLTKGIARSTIIAGALLLVLG HHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHH VAAAIQSVTVFGVTGLIAAGTGGLLVVLGTWQVSGRLLFALLSFSVVGAVLALATPVVRE HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLFGTQQQPGWVGTHAYWLGAQWWHPLVVVGLIALVAIMIAAANPGRR HHHCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA