Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639359
Identifier: 121639359
GI number: 121639359
Start: 3838970
End: 3839812
Strand: Direct
Name: 121639359
Synonym: BCG_3504
Alternate gene names: NA
Gene position: 3838970-3839812 (Clockwise)
Preceding gene: 121639358
Following gene: 121639369
Centisome position: 87.76
GC content: 67.5
Gene sequence:
>843_bases GTGCCCCGGATCCGCAAGCTCGTCGCCGCCCTGCACCGCCGGGGACCACACCGTGTTTTGCGCGGTGACCTGGCTTTTGC CGGCCTACCCGGGGTGGTGTACACCCCCGAGGCGGGGCTGCACCTTCCCGGTGTCGCCTTCGGCCACGACTGGCTCACCG GCACCTCTCGCTATTCGGGTCTATTGGAGCATTTGGCGTCATGGGGCATCGTGGCCGCCGCCCCCGACAGCGAGCGCGGA CTGGCCCCATCGGTCCTGAATCTGGCCTTCGATCTGGGCGTTGCCCTCGACATCGTGGCCGGTGTCCGCCTTGGGCCTGG AAAAATCAGCGTGCACCCCGCCAAGCTCGGGCTGGTGGGCCATGGTTTCGGTGGCTCGGCCGCCGTGTTCGCCGCCGCCG GCTTGACCGGCACGCACGTCAAGTCCGTGGCGGCGATATTCCCGACGGTGACCAATCCGGCCGCGGAGCAGCCAGCCGCG ACCCTAGACGTTCCGGGACTGATTCTGACCGCACCTGGCGATCCGAAGACGCTGACCTCCAACGCCCTCGGGCTATCCCG GGCTTGGGATAAGGCCACCCTACGCATCGTCAGCAAAGCCCGAGCCGGTGGTCTGGTTGAGGGCAGACGACTGACGAAGG TGTTGGGGCTCCCAGGCCCACACCGCCGGACGCAGCGTTCGGTCCGGGCGCTGCTGACCGGGTACCTGTTGTACACGCTC GGCGGCGACAAGACTTATCGCAGGTTCGCCGATCCAGACCTGCAGCTGCCCAAGACGGACCCGATCGACCCTGAAGCGCC GCCGATCACCCCGGGGGAGAAGATCGTGACGCTGTTGAAGTAG
Upstream 100 bases:
>100_bases GGGCTGGTATCCAGACCCGTCCGGGGCGGGACTGCGTTACTGGGACGGTGCGACGTGGACCCACTGGACCCATCCGCCAC GTCACCGCTAACGTCGACGG
Downstream 100 bases:
>100_bases CGCGGGATACCCCGACCCGTCACGGCCCCGCCTGCGGAAGCTCGTCGGCGGCGATCTCACAGGGGGTGGCTCCCTCGGAC AGCGCTTCCGGCGAAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSGLLEHLASWGIVAAAPDSERG LAPSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLTGTHVKSVAAIFPTVTNPAAEQPAA TLDVPGLILTAPGDPKTLTSNALGLSRAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYLLYTL GGDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK
Sequences:
>Translated_280_residues MPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSGLLEHLASWGIVAAAPDSERG LAPSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLTGTHVKSVAAIFPTVTNPAAEQPAA TLDVPGLILTAPGDPKTLTSNALGLSRAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYLLYTL GGDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK >Mature_279_residues PRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSGLLEHLASWGIVAAAPDSERGL APSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLTGTHVKSVAAIFPTVTNPAAEQPAAT LDVPGLILTAPGDPKTLTSNALGLSRAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYLLYTLG GDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29241; Mature: 29110
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSG CCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECCHHCCCCHHHHH LLEHLASWGIVAAAPDSERGLAPSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVG HHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEEHHEEEEEE HGFGGSAAVFAAAGLTGTHVKSVAAIFPTVTNPAAEQPAATLDVPGLILTAPGDPKTLTS CCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEECCCCCCEECC NALGLSRAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYLLYTL CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEE GGDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEECC >Mature Secondary Structure PRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSG CHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECCHHCCCCHHHHH LLEHLASWGIVAAAPDSERGLAPSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVG HHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEEHHEEEEEE HGFGGSAAVFAAAGLTGTHVKSVAAIFPTVTNPAAEQPAATLDVPGLILTAPGDPKTLTS CCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEECCCCCCEECC NALGLSRAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYLLYTL CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEE GGDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA