Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is whiB3
Identifier: 121639341
GI number: 121639341
Start: 3821394
End: 3821702
Strand: Direct
Name: whiB3
Synonym: BCG_3486
Alternate gene names: NA
Gene position: 3821394-3821702 (Clockwise)
Preceding gene: 121639337
Following gene: 121639350
Centisome position: 87.36
GC content: 64.08
Gene sequence:
>309_bases ATGCCACAGCCGGAGCAGCTACCGGGACCCAACGCAGACATCTGGAACTGGCAATTGCAAGGCCTGTGTCGCGGCATGGA CTCATCGATGTTCTTCCATCCCGACGGCGAGCGTGGCCGTGCCCGAACGCAGCGCGAACAACGCGCCAAGGAAATGTGTC GGCGCTGCCCCGTGATCGAGGCGTGCCGATCCCATGCGTTAGAGGTCGGTGAGCCCTATGGCGTTTGGGGTGGCCTGTCC GAATCCGAGCGCGACCTACTCCTCAAGGGCACCATGGGACGCACCCGCGGCATCCGCCGCACAGCTTAA
Upstream 100 bases:
>100_bases ACGGTAGTCATCGGTGACGCCACTCCACTTCAGTTGCACAACTCGCGCGTCCGCGAACCCAACCTCCACTTGGGCGTGTC GTGCAGAGAGGGAATCAGCA
Downstream 100 bases:
>100_bases GCCGCGCGAGCAGACGCTAAAGCCCCCGCACGCTCGGCGTGTCGGGGGCTTTTGCGTCTGCTGACCGGAGTTCAGTGCGC GTGCCCGTGGTGATGGTCGT
Product: transcriptional regulatory protein whiB-like whib3
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; WhiB-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator; WhiB Family Transcriptional Factor; Whib Family Transcriptional Regulator; Transcriptional Regulator WhiB; Transcriptional Regulator WhiD; WhiB Protein; Whib-Like Transcriptional Regulator; WhiB Transcriptional Regulator
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MPQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAKEMCRRCPVIEACRSHALEVGEPYGVWGGLS ESERDLLLKGTMGRTRGIRRTA
Sequences:
>Translated_102_residues MPQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAKEMCRRCPVIEACRSHALEVGEPYGVWGGLS ESERDLLLKGTMGRTRGIRRTA >Mature_101_residues PQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAKEMCRRCPVIEACRSHALEVGEPYGVWGGLSE SERDLLLKGTMGRTRGIRRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11612; Mature: 11481
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAKEMCRRCPVIE CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHH ACRSHALEVGEPYGVWGGLSESERDLLLKGTMGRTRGIRRTA HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure PQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAKEMCRRCPVIE CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHH ACRSHALEVGEPYGVWGGLSESERDLLLKGTMGRTRGIRRTA HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA