Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is pmmB [C]
Identifier: 121639231
GI number: 121639231
Start: 3683435
End: 3685039
Strand: Direct
Name: pmmB [C]
Synonym: BCG_3373
Alternate gene names: 121639231
Gene position: 3683435-3685039 (Clockwise)
Preceding gene: 121639230
Following gene: 121639233
Centisome position: 84.2
GC content: 69.28
Gene sequence:
>1605_bases GTGACGCCAGAGAATTGGATCGCCCACGACCCGGACCCGCAGACGGCCGCCGAGCTCGCCGCCTGCGGCCCCGACGAGCT GAAAGCGCGGTTCAGCCGCCCACTGGCGTTCGGCACCGCGGGGTTGCGCGGGCACCTGCGGGGCGGGCCGGACGCGATGA ACCTGGCGGTGGTGTTGCGCGCCACCTGGGCGGTGGCACGGGTGCTCACGGATCGAGGTCTGGCTGGTTCGCCGGTGATC GTGGGGCGCGACGCTCGGCACGGCTCACCGGCGTTTGCCGCTGCGGCCGCCGAAGTGCTTGCCGCCGCAGGTTTTTCCGT GCTGCTTCTGCCCGATCCCGCACCCACCCCGGTGGTGGCGTTCGCGGTGCGGCACACCGGCGCCGCCGCTGGGATACAGA TCACGGCGTCACACAACCCGGCGACCGACAACGGCTACAAGGTCTATGTCGACGGCGGCCTTCAGCTCCTCGCCCCTACC GACCGGCAGATCGAAGCCGCGATGGCCACCGCGCCCCCGGCCGATCAGATCGCCAGGAAGACCGTCAACCCCAGTGAAAA CCGCGCCTCCGATCTGATCGACCGTTATATCCAGCGTGCGGCCGGGGTCCGAAGGTGCGCCGGTTCGGTCCGGGTGGCCC TGACGCCGCTGCACGGGGTTGGCGGGGCGATGGCCGTCGAGACCCTTCGGCGAGCCGGTTTCACCGAGGTGCATACCGTG GCGACGCAATTCGCGCCGAATCCCGACTTCCCCACCGTGACATTGCCGAACCCCGAGGAGCCCGGAGCCACCGACGCACT GCTCACCCTGGCTACCGACGTGGACGCCGACGTCGCGATCGCGCTGGATCCCGATGCGGATCGCTGCGCGGTCGGGATAC CCACGGTGTCGGGATGGCGGATGCTGTCCGGTGACGAAACCGGTTGGCTACTAGGTGATTACATCTTGTCGCAAACCGAC GACCGGGCGTCGCCGCCGGAAACCAGGGTGGTGGCCAGCACCGTGGTGTCGTCGCGGATGCTGGCGGCGATCGCCGCGCA TCACGCTGCCGTGCACGTGGAGACCCTCACCGGCTTTAAGTGGCTGGCGCGCGCCGATGCGAACCTGCCCGGCACCCTGG TGTACGCCTACGAGGAAGCGATCGGGCACTGCGTCGACCCCACCGCGGTGCGTGACAAAGACGGCATCAGCGCCGCGGTG TTGGTGTGCGATCTGGTGGCCGCGCTCAAAGGCCAGGGTCGTTCGGTGACCGACGCGCTCGACGAGCTCGCCCGATGCTA CGGCGTGCATGAGGTTGCCGCCCTGTCACGCCCCGTGGGCGGCGCCGTCGAGACCACCGACCTGATGCGACGGCTCCGCG AGGACCCGCCGCGTCGGCTGGCCGGTTTCCCCGCCACGGTCACCGATATCGGCGACACGCTGATCCTCACCGGCGGCGAC GACAACATGTTGGTCAGGGTGGCGGTGCGGCCTTCTGGAACAGAACCGAAGCTGAAGTGCTACTTGGAGATTCGCTGCGC GGTGACCGGTGACCTACCAGCTGCCCGACAGCTGGTGCGGGCGAGGATCGATGAGCTGTCGGCTAGCGTGCGGCGGTGGT GGTGA
Upstream 100 bases:
>100_bases CGGCGAGCCGCTGAGCCACGCCGAGGTGCTCGCCGCCGGAGCCGCATCGGCGACTCGGATGGGCGCGCTGCTAGCCGACG TGATCGCCCGGTTCTAAGCC
Downstream 100 bases:
>100_bases CTCAGCGCGGGCCGAACTGGCGATCGCCGGCATCGCCGAGACCGGGCACAATGTAGGCGACCTCGTTAAGCCCTTCGTCG ATGGCCGCAGTGAACAACCG
Product: putative phosphomannomutase pmmB
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MTPENWIAHDPDPQTAAELAACGPDELKARFSRPLAFGTAGLRGHLRGGPDAMNLAVVLRATWAVARVLTDRGLAGSPVI VGRDARHGSPAFAAAAAEVLAAAGFSVLLLPDPAPTPVVAFAVRHTGAAAGIQITASHNPATDNGYKVYVDGGLQLLAPT DRQIEAAMATAPPADQIARKTVNPSENRASDLIDRYIQRAAGVRRCAGSVRVALTPLHGVGGAMAVETLRRAGFTEVHTV ATQFAPNPDFPTVTLPNPEEPGATDALLTLATDVDADVAIALDPDADRCAVGIPTVSGWRMLSGDETGWLLGDYILSQTD DRASPPETRVVASTVVSSRMLAAIAAHHAAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAV LVCDLVAALKGQGRSVTDALDELARCYGVHEVAALSRPVGGAVETTDLMRRLREDPPRRLAGFPATVTDIGDTLILTGGD DNMLVRVAVRPSGTEPKLKCYLEIRCAVTGDLPAARQLVRARIDELSASVRRWW
Sequences:
>Translated_534_residues MTPENWIAHDPDPQTAAELAACGPDELKARFSRPLAFGTAGLRGHLRGGPDAMNLAVVLRATWAVARVLTDRGLAGSPVI VGRDARHGSPAFAAAAAEVLAAAGFSVLLLPDPAPTPVVAFAVRHTGAAAGIQITASHNPATDNGYKVYVDGGLQLLAPT DRQIEAAMATAPPADQIARKTVNPSENRASDLIDRYIQRAAGVRRCAGSVRVALTPLHGVGGAMAVETLRRAGFTEVHTV ATQFAPNPDFPTVTLPNPEEPGATDALLTLATDVDADVAIALDPDADRCAVGIPTVSGWRMLSGDETGWLLGDYILSQTD DRASPPETRVVASTVVSSRMLAAIAAHHAAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAV LVCDLVAALKGQGRSVTDALDELARCYGVHEVAALSRPVGGAVETTDLMRRLREDPPRRLAGFPATVTDIGDTLILTGGD DNMLVRVAVRPSGTEPKLKCYLEIRCAVTGDLPAARQLVRARIDELSASVRRWW >Mature_533_residues TPENWIAHDPDPQTAAELAACGPDELKARFSRPLAFGTAGLRGHLRGGPDAMNLAVVLRATWAVARVLTDRGLAGSPVIV GRDARHGSPAFAAAAAEVLAAAGFSVLLLPDPAPTPVVAFAVRHTGAAAGIQITASHNPATDNGYKVYVDGGLQLLAPTD RQIEAAMATAPPADQIARKTVNPSENRASDLIDRYIQRAAGVRRCAGSVRVALTPLHGVGGAMAVETLRRAGFTEVHTVA TQFAPNPDFPTVTLPNPEEPGATDALLTLATDVDADVAIALDPDADRCAVGIPTVSGWRMLSGDETGWLLGDYILSQTDD RASPPETRVVASTVVSSRMLAAIAAHHAAVHVETLTGFKWLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAVL VCDLVAALKGQGRSVTDALDELARCYGVHEVAALSRPVGGAVETTDLMRRLREDPPRRLAGFPATVTDIGDTLILTGGDD NMLVRVAVRPSGTEPKLKCYLEIRCAVTGDLPAARQLVRARIDELSASVRRWW
Specific function: This Enzyme Participates In Both The Breakdown And Synthesis Of Glucose. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=570, Percent_Identity=32.8070175438597, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI31377548, Length=558, Percent_Identity=30.1075268817204, Blast_Score=201, Evalue=2e-51, Organism=Escherichia coli, GI1788361, Length=234, Percent_Identity=29.0598290598291, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1789566, Length=261, Percent_Identity=31.4176245210728, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71993870, Length=582, Percent_Identity=31.786941580756, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71993878, Length=307, Percent_Identity=33.8762214983713, Blast_Score=149, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6323934, Length=570, Percent_Identity=30.7017543859649, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI20129809, Length=558, Percent_Identity=30.8243727598566, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24651977, Length=456, Percent_Identity=32.2368421052632, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI24653722, Length=462, Percent_Identity=30.952380952381, Blast_Score=188, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 56166; Mature: 56035
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPENWIAHDPDPQTAAELAACGPDELKARFSRPLAFGTAGLRGHLRGGPDAMNLAVVLR CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHH ATWAVARVLTDRGLAGSPVIVGRDARHGSPAFAAAAAEVLAAAGFSVLLLPDPAPTPVVA HHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEE FAVRHTGAAAGIQITASHNPATDNGYKVYVDGGLQLLAPTDRQIEAAMATAPPADQIARK EEEHHCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHCCCCHHHHHHH TVNPSENRASDLIDRYIQRAAGVRRCAGSVRVALTPLHGVGGAMAVETLRRAGFTEVHTV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHH ATQFAPNPDFPTVTLPNPEEPGATDALLTLATDVDADVAIALDPDADRCAVGIPTVSGWR HHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEECCCCCCCCE MLSGDETGWLLGDYILSQTDDRASPPETRVVASTVVSSRMLAAIAAHHAAVHVETLTGFK EECCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCHH WLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAVLVCDLVAALKGQGRSVTDAL HHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH DELARCYGVHEVAALSRPVGGAVETTDLMRRLREDPPRRLAGFPATVTDIGDTLILTGGD HHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCHHCCCCEEEEECCC DNMLVRVAVRPSGTEPKLKCYLEIRCAVTGDLPAARQLVRARIDELSASVRRWW CCEEEEEEECCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPENWIAHDPDPQTAAELAACGPDELKARFSRPLAFGTAGLRGHLRGGPDAMNLAVVLR CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHH ATWAVARVLTDRGLAGSPVIVGRDARHGSPAFAAAAAEVLAAAGFSVLLLPDPAPTPVVA HHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEE FAVRHTGAAAGIQITASHNPATDNGYKVYVDGGLQLLAPTDRQIEAAMATAPPADQIARK EEEHHCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHCCCCHHHHHHH TVNPSENRASDLIDRYIQRAAGVRRCAGSVRVALTPLHGVGGAMAVETLRRAGFTEVHTV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHH ATQFAPNPDFPTVTLPNPEEPGATDALLTLATDVDADVAIALDPDADRCAVGIPTVSGWR HHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEECCCCCCCCE MLSGDETGWLLGDYILSQTDDRASPPETRVVASTVVSSRMLAAIAAHHAAVHVETLTGFK EECCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCHH WLARADANLPGTLVYAYEEAIGHCVDPTAVRDKDGISAAVLVCDLVAALKGQGRSVTDAL HHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH DELARCYGVHEVAALSRPVGGAVETTDLMRRLREDPPRRLAGFPATVTDIGDTLILTGGD HHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCHHCCCCEEEEECCC DNMLVRVAVRPSGTEPKLKCYLEIRCAVTGDLPAARQLVRARIDELSASVRRWW CCEEEEEEECCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]