Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638174
Identifier: 121638174
GI number: 121638174
Start: 2541122
End: 2542126
Strand: Reverse
Name: 121638174
Synonym: BCG_2309c
Alternate gene names: NA
Gene position: 2542126-2541122 (Counterclockwise)
Preceding gene: 121638180
Following gene: 121638167
Centisome position: 58.11
GC content: 63.98
Gene sequence:
>1005_bases GTGGGCGCGCCTTTGCGGCACTGTCTTTTGGTGGCGGCCGCGTTGTCGCTGGGCTGTGGCGTGGCGGCGGCCGATCCCGG ATACGTGGCAAATGTGATCCCGTGCGAACAGCGCACGCTGGTCTTGTCGGCGTTTCCGGCTGAGGCCGACGCGGTGCTGG CGCACACCGCGCTGGACGCCAACCCGGTGGTGGTCGCCGACCGTCGTCGCTACTACCTGGGCTCGATCAGCGGCAAGAAG GTGATTGTGGCGATGACCGGCATCGGCCTAGTGAACGCTACCAACACCACCGAGACCGCCTTCGCACGCTTTACCTGTGC TTCTTCCATTGCCATTGCCGCCGTGATGTTCTCGGGCGTCGCCGGTGGTGCCGGCCGCACCAGCATTGGGGACGTGGCAA TACCAGCACGGTGGACCCTGGACAACGGGGCAACATTCCGTGGGGTCGATCCCGGCATGCTGGCTACTGCCCAGACGCTT TCTGTTGTACTGGACAACATCAACACGCTCGGCAATCCTGTCTGTCTGTGCAGGAACGTTCCGGTCGTCCGGTTGAACCA CCTGGGGCGCCAGCCGCAACTGTTCGTCGGCGGTGACGGGTCTAGCTCCGACAAGAACAACGGCCAGGCTTTTCCTTGCA TCCCGAACGGCGGCAGCGTTTTTGGCTGCCAACCCTGTAGTGCACCCGATCGCTCACTTGGCTATACCGGTAACTTTTTC CAGGCGGCGGGACCCTGGCTGAAGAACGCTCTGATCAGCAACCTGAACATCGTATCGACGGTGAACCCCGGCTTCGACGC GGTTGACCAGGAGACGGCAGCCGCGCAGGCGGTCGCCGATGCACACGGCGTCCCGTTCCTGGGAATTCGCGGTATGTCCG ACGGGCCCGGCGACCCGCTGCATCTGCCGGGCTTCCCCGTCCAGTTCTTCGTTTACAAGCAGATTGCGGCCAACAACGCC GCCCGGGTCACCGAAGCCTTCCTGCAGAACTGGGCCGGCGTCTGA
Upstream 100 bases:
>100_bases TGGTGCGCGAAAATCAGGGCCAAGCCCCAAATCGGCCACGGCTAAATGACAGAGAGTTCCGGCATCCATGTCAAATCACG ATTTTTGGGGATAAGGGATT
Downstream 100 bases:
>100_bases CTATGCAGTGCCACGGCCGACGGGACGGGTCGGATCCGAACTCCACTCCGACCATGACCCTGGAAACAGCGCCGCATCCT GGCCGATCACTGCCAGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MGAPLRHCLLVAAALSLGCGVAAADPGYVANVIPCEQRTLVLSAFPAEADAVLAHTALDANPVVVADRRRYYLGSISGKK VIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGVAGGAGRTSIGDVAIPARWTLDNGATFRGVDPGMLATAQTL SVVLDNINTLGNPVCLCRNVPVVRLNHLGRQPQLFVGGDGSSSDKNNGQAFPCIPNGGSVFGCQPCSAPDRSLGYTGNFF QAAGPWLKNALISNLNIVSTVNPGFDAVDQETAAAQAVADAHGVPFLGIRGMSDGPGDPLHLPGFPVQFFVYKQIAANNA ARVTEAFLQNWAGV
Sequences:
>Translated_334_residues MGAPLRHCLLVAAALSLGCGVAAADPGYVANVIPCEQRTLVLSAFPAEADAVLAHTALDANPVVVADRRRYYLGSISGKK VIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGVAGGAGRTSIGDVAIPARWTLDNGATFRGVDPGMLATAQTL SVVLDNINTLGNPVCLCRNVPVVRLNHLGRQPQLFVGGDGSSSDKNNGQAFPCIPNGGSVFGCQPCSAPDRSLGYTGNFF QAAGPWLKNALISNLNIVSTVNPGFDAVDQETAAAQAVADAHGVPFLGIRGMSDGPGDPLHLPGFPVQFFVYKQIAANNA ARVTEAFLQNWAGV >Mature_333_residues GAPLRHCLLVAAALSLGCGVAAADPGYVANVIPCEQRTLVLSAFPAEADAVLAHTALDANPVVVADRRRYYLGSISGKKV IVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGVAGGAGRTSIGDVAIPARWTLDNGATFRGVDPGMLATAQTLS VVLDNINTLGNPVCLCRNVPVVRLNHLGRQPQLFVGGDGSSSDKNNGQAFPCIPNGGSVFGCQPCSAPDRSLGYTGNFFQ AAGPWLKNALISNLNIVSTVNPGFDAVDQETAAAQAVADAHGVPFLGIRGMSDGPGDPLHLPGFPVQFFVYKQIAANNAA RVTEAFLQNWAGV
Specific function: Unknown
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: NA
Molecular weight: Translated: 34410; Mature: 34278
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPLRHCLLVAAALSLGCGVAAADPGYVANVIPCEQRTLVLSAFPAEADAVLAHTALDA CCCHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCC NPVVVADRRRYYLGSISGKKVIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGV CCEEEECCCEEEEECCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC AGGAGRTSIGDVAIPARWTLDNGATFRGVDPGMLATAQTLSVVLDNINTLGNPVCLCRNV CCCCCCCCCCCEEECEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC PVVRLNHLGRQPQLFVGGDGSSSDKNNGQAFPCIPNGGSVFGCQPCSAPDRSLGYTGNFF CEEEHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCHH QAAGPWLKNALISNLNIVSTVNPGFDAVDQETAAAQAVADAHGVPFLGIRGMSDGPGDPL HHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC HLPGFPVQFFVYKQIAANNAARVTEAFLQNWAGV CCCCCCHHHEEHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GAPLRHCLLVAAALSLGCGVAAADPGYVANVIPCEQRTLVLSAFPAEADAVLAHTALDA CCHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCC NPVVVADRRRYYLGSISGKKVIVAMTGIGLVNATNTTETAFARFTCASSIAIAAVMFSGV CCEEEECCCEEEEECCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC AGGAGRTSIGDVAIPARWTLDNGATFRGVDPGMLATAQTLSVVLDNINTLGNPVCLCRNV CCCCCCCCCCCEEECEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC PVVRLNHLGRQPQLFVGGDGSSSDKNNGQAFPCIPNGGSVFGCQPCSAPDRSLGYTGNFF CEEEHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCHH QAAGPWLKNALISNLNIVSTVNPGFDAVDQETAAAQAVADAHGVPFLGIRGMSDGPGDPL HHCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC HLPGFPVQFFVYKQIAANNAARVTEAFLQNWAGV CCCCCCHHHEEHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]