Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638169
Identifier: 121638169
GI number: 121638169
Start: 2538422
End: 2538799
Strand: Direct
Name: 121638169
Synonym: BCG_2304
Alternate gene names: NA
Gene position: 2538422-2538799 (Clockwise)
Preceding gene: 121638168
Following gene: 121638170
Centisome position: 58.03
GC content: 64.29
Gene sequence:
>378_bases GTGAGCCGGCGCCGCCCGCTGATCGAACCAGCAACGGTTCAGGTTTTGGCCATTGCTTTCACAGACTCATTCAGCGTTTC ATTGCACTGGCCGCAGCGCGAGCAGGGCTGCCGCACAGCGATCTTGGCGCCTATGCGAAGGTGGTGCGATGGTGATGTGG ACGGGCGAAAGTTACTGCCACCGGCACGCCGCACTGGCACCCAACAGAGGAGGATCAGGCCCGCCGCACCCAGGGTCTAC ACGACCGGCGACATCCTGCGTGATCGGAAGGGCATAGCGCCATGGCAGGAACAACGCGAACCGGGCTGGGCGCCGTTCGG TTGGCTGCACGAGCCCTCGGGCGCAAGGTGCCCAAAAGCCGACGGGCAGTCAGTCTAA
Upstream 100 bases:
>100_bases CGTTGCGCAACCAAAACCTCATCGACGACATCGTGCTGCGCGAGCTGCAGGCGGCGATGGATCTAGAGGAAGTGCAACTC TTGGACCCCGCCGACGCCGA
Downstream 100 bases:
>100_bases GTGTCTTGATAGGTGCGGTGATAGCAGCTCTTGCCGGGGCGCTGATTGCGGTAACCGTACCGGCGCGGCCGAATCGCCCT GAGGCCGACCGTGAAGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSRRRPLIEPATVQVLAIAFTDSFSVSLHWPQREQGCRTAILAPMRRWCDGDVDGRKLLPPARRTGTQQRRIRPAAPRVY TTGDILRDRKGIAPWQEQREPGWAPFGWLHEPSGARCPKADGQSV
Sequences:
>Translated_125_residues MSRRRPLIEPATVQVLAIAFTDSFSVSLHWPQREQGCRTAILAPMRRWCDGDVDGRKLLPPARRTGTQQRRIRPAAPRVY TTGDILRDRKGIAPWQEQREPGWAPFGWLHEPSGARCPKADGQSV >Mature_124_residues SRRRPLIEPATVQVLAIAFTDSFSVSLHWPQREQGCRTAILAPMRRWCDGDVDGRKLLPPARRTGTQQRRIRPAAPRVYT TGDILRDRKGIAPWQEQREPGWAPFGWLHEPSGARCPKADGQSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2288_MYCTU (P64975)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: D70732 - RefSeq: NP_216804.1 - RefSeq: NP_336816.1 - EnsemblBacteria: EBMYCT00000002640 - EnsemblBacteria: EBMYCT00000070979 - GeneID: 887702 - GeneID: 924077 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2345.1 - KEGG: mtu:Rv2288 - TIGR: MT2345.1 - TubercuList: Rv2288 - GeneTree: EBGT00050000018692 - HOGENOM: HBG565232 - ProtClustDB: CLSK791754
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14167; Mature: 14036
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRPLIEPATVQVLAIAFTDSFSVSLHWPQREQGCRTAILAPMRRWCDGDVDGRKLLP CCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PARRTGTQQRRIRPAAPRVYTTGDILRDRKGIAPWQEQREPGWAPFGWLHEPSGARCPKA CHHHCCCCHHCCCCCCCEEEECHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC DGQSV CCCCC >Mature Secondary Structure SRRRPLIEPATVQVLAIAFTDSFSVSLHWPQREQGCRTAILAPMRRWCDGDVDGRKLLP CCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PARRTGTQQRRIRPAAPRVYTTGDILRDRKGIAPWQEQREPGWAPFGWLHEPSGARCPKA CHHHCCCCHHCCCCCCCEEEECHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC DGQSV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036