Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is lppN [H]
Identifier: 121638152
GI number: 121638152
Start: 2523150
End: 2523677
Strand: Direct
Name: lppN [H]
Synonym: BCG_2287
Alternate gene names: 121638152
Gene position: 2523150-2523677 (Clockwise)
Preceding gene: 121638148
Following gene: 121638153
Centisome position: 57.68
GC content: 63.64
Gene sequence:
>528_bases ATGCGGCTTCCAGGCCGTCATGTGTTATACGCCCTGTCGGCGGTCACCATGCTGGCGGCCTGCTCCAGCAACGGTGCTCG TGGCGGCATTGCGTCGACGAACATGAATCCGACAAACCCACCCGCAACTGCGGAGACCGCTACCGTCTCACCGACACCGG CTCCGCAGAGCGCGCGAACCGAGACCTGGATTAACCTTCAAGTCGGCGACTGCCTGGCCGACCTGCCGCCGGCGGATCTG AGCCGGATAACCGTCACGATTGTCGATTGCGCGACAGCGCATTCGGCCGAGGTATACCTGCGTGCTCCGGTGGCCGTCGA TGCCGCCGTCGTTTCCATGGCCAATCGTGATTGTGCTGCCGGATTTGCGCCCTACACAGGCCAATCCGTCGACACCAGCC CATACTCGGTGGCGTATCTCATCGACTCGCATCAGGATAGAACCGGGGCCGATCCCACCCCGAGCACCGTCATCTGTTTG CTGCAGCCCGCCAACGGTCAGTTGCTCACCGGGTCGGCCCGTCGCTGA
Upstream 100 bases:
>100_bases TAAGGGTCGCGCATCGTTGGCCACAACAGGCGCGACTTGCGCGAATGTGCTTTCTCGCCGGCATCGCGATGCCTAACTTT ATGTTTTCGAGGAGACTGCG
Downstream 100 bases:
>100_bases CCGGACGACCCGTTGTTCGGGTGCGTGGCACACGACACCAACCGGTATCGTCTGTTGCCGTGACTTCTCCGATTGCTCCG AATACCAAAAGCGACGGTTC
Product: putative lipoprotein lppN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRLPGRHVLYALSAVTMLAACSSNGARGGIASTNMNPTNPPATAETATVSPTPAPQSARTETWINLQVGDCLADLPPADL SRITVTIVDCATAHSAEVYLRAPVAVDAAVVSMANRDCAAGFAPYTGQSVDTSPYSVAYLIDSHQDRTGADPTPSTVICL LQPANGQLLTGSARR
Sequences:
>Translated_175_residues MRLPGRHVLYALSAVTMLAACSSNGARGGIASTNMNPTNPPATAETATVSPTPAPQSARTETWINLQVGDCLADLPPADL SRITVTIVDCATAHSAEVYLRAPVAVDAAVVSMANRDCAAGFAPYTGQSVDTSPYSVAYLIDSHQDRTGADPTPSTVICL LQPANGQLLTGSARR >Mature_175_residues MRLPGRHVLYALSAVTMLAACSSNGARGGIASTNMNPTNPPATAETATVSPTPAPQSARTETWINLQVGDCLADLPPADL SRITVTIVDCATAHSAEVYLRAPVAVDAAVVSMANRDCAAGFAPYTGQSVDTSPYSVAYLIDSHQDRTGADPTPSTVICL LQPANGQLLTGSARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18081; Mature: 18081
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPGRHVLYALSAVTMLAACSSNGARGGIASTNMNPTNPPATAETATVSPTPAPQSART CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCC ETWINLQVGDCLADLPPADLSRITVTIVDCATAHSAEVYLRAPVAVDAAVVSMANRDCAA EEEEEEEECCHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCC GFAPYTGQSVDTSPYSVAYLIDSHQDRTGADPTPSTVICLLQPANGQLLTGSARR CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCC >Mature Secondary Structure MRLPGRHVLYALSAVTMLAACSSNGARGGIASTNMNPTNPPATAETATVSPTPAPQSART CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCC ETWINLQVGDCLADLPPADLSRITVTIVDCATAHSAEVYLRAPVAVDAAVVSMANRDCAA EEEEEEEECCHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCC GFAPYTGQSVDTSPYSVAYLIDSHQDRTGADPTPSTVICLLQPANGQLLTGSARR CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]