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The map label for this gene is ygcU [H]

Identifier: 121638134

GI number: 121638134

Start: 2503963

End: 2505552

Strand: Direct

Name: ygcU [H]

Synonym: BCG_2269

Alternate gene names: 121638134

Gene position: 2503963-2505552 (Clockwise)

Preceding gene: 121638131

Following gene: 121638135

Centisome position: 57.24

GC content: 68.3

Gene sequence:

>1590_bases
ATGAAATGGGACGCGTGGGGAGATCCCGCCGCGGCCAAGCCACTTTCTGATGGCGTCCGGTCGTTGCTGAAGCAGGTTGT
GGGCCTAGCGGACTCGGAGCAGCCCGAACTCGACCCCGCGCAGGTGCAGCTGCGCCCGTCCGCCCTGTCGGGGGCAGACC
ACGATGCGCTGGCGCGCATCGTCGGCACCGAGTATTTCCGCACCGCCGATCGCGACCGGCTGCTGCACGCCGGCGGCAAG
TCCACCCCAGACCTGCTGCGGCGCAAAGACACCGGTGTCCAGGATGCGCCCGACGCGGTGTTGCTGCCCGGCGGCCCCAA
CGGGGAGGACGCCGTCGCCGACATCTTGCACTACTGCTCCGACCACGGCATTGCCGTGGTCCCGTTTGGTGGCGGCACCA
GCGTCGTTGGTGGGCTTGACCCCGTTCGCAACGACTTTCGCGCGGTGATCTCCCTGGATATGCGGCGCTTCGACCGGCTG
CACCGGATCGATGAGGTGTCCGGCGAGGCCGAACTGGAGGCCGGTGTCACCGGGCCGGAAGCCGAACGTCTGCTCGGCGA
ACATGGCTTCTCGCTCGGGCACTTCCCGCAGAGCTTCGAGTTCGCCACCATCGGGGGGTTCGCGGCCACCCGCTCGTCAG
GCCAGGACTCGGCTGGCTATGGCCGGTTCAACGACATGATTCTTGGGCTGCGCATGATCACTCCGGTGGGGGTGCTGGAT
CTGGGTCGAGTGCCGGCGTCGGCGGCCGGCCCGGACCTGCGCCAGCTGGCGATCGGCTCCGAAGGCGTCTTCGGCGTCAT
CACCCGGGTGCGGCTGCGGGTGCACCGGATTCCGGAATCGACGCGTTACGAGGCGTGGTCGTTTCCCGATTTCGCGACCG
GGGTTGCGGCGCTGCGCACCATCACCCAAACCGGCACCGGCCCCACCGTCGTTCGGCTCTCTGACGAGGCCGAAACCGGC
GTCAACCTCGCCACCACCGAGGCGATCGGGGAAACCCAAATCACCGGCGGCTGTTTGGGGATCACCGTGTTCGAGGGCAC
CCAGGAACACACCGAGAGCAGGCACGCCGAGACGCGCGCGTTGCTGGCGGCCCGAGGCGGCACCTCGTTGGGCGAAGGAC
CGGCGCGGGCCTGGGAACGCGGCAGGTTCGCCGCGCCGTATCTGCGTGACTCCCTGTTGGCCGCGGGAGCGCTCTGCGAG
ACCCTCGAGACCGCCACGGTGTGGTCCAACACCCCCGTGCTGAAGGCCGCCGTGACCGAAGCGCTCACCACCTCGCTGGC
CGCATCGGGTACACCGGCGCTGGTGATGTGCCACGTGTCGCACGTGTATCCCACCGGCGCGTCGTTGTACTTCACCGTTG
TCGCCGGGCAGCGAGGCGATCCGATCGAGCAGTGGCTGGCCGCCAAGAAGGCGGCGTCGGATGCGATCATGGCCACCGGA
GGAACGATCACGCACCACCATGCGGTTGGTTCCGACCACCGCCCCTGGATGCGCGCGGAGGTGGGTGATCTGGGCGTGAC
ATTGTTGCGCACGATCAAGGCGACGCTGGATCCGGCCGGAATTCTCAACCCCGGCAAGCTGATTCCATGA

Upstream 100 bases:

>100_bases
GCCCGCAGGATACGACCACCGGTATCCGCGCGGTCATTACTCATTGACAGCATGTGTAATACTGTAACGCGTGACTCACC
GCGAGGAACTCCTTCCACCG

Downstream 100 bases:

>100_bases
GCGCCGGGCAGCTGCGCCGGCATGAGATCGGCAAGGTCACCGCGCTGACCAATCCCCTGTCAGGCCATGGCGCCGCCGTA
AAGGCTGCACACGGCGCGAT

Product: putative flavoprotein

Products: alkyl-glycerone 3-phosphate; long-chain acid anion

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARIVGTEYFRTADRDRLLHAGGK
STPDLLRRKDTGVQDAPDAVLLPGGPNGEDAVADILHYCSDHGIAVVPFGGGTSVVGGLDPVRNDFRAVISLDMRRFDRL
HRIDEVSGEAELEAGVTGPEAERLLGEHGFSLGHFPQSFEFATIGGFAATRSSGQDSAGYGRFNDMILGLRMITPVGVLD
LGRVPASAAGPDLRQLAIGSEGVFGVITRVRLRVHRIPESTRYEAWSFPDFATGVAALRTITQTGTGPTVVRLSDEAETG
VNLATTEAIGETQITGGCLGITVFEGTQEHTESRHAETRALLAARGGTSLGEGPARAWERGRFAAPYLRDSLLAAGALCE
TLETATVWSNTPVLKAAVTEALTTSLAASGTPALVMCHVSHVYPTGASLYFTVVAGQRGDPIEQWLAAKKAASDAIMATG
GTITHHHAVGSDHRPWMRAEVGDLGVTLLRTIKATLDPAGILNPGKLIP

Sequences:

>Translated_529_residues
MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARIVGTEYFRTADRDRLLHAGGK
STPDLLRRKDTGVQDAPDAVLLPGGPNGEDAVADILHYCSDHGIAVVPFGGGTSVVGGLDPVRNDFRAVISLDMRRFDRL
HRIDEVSGEAELEAGVTGPEAERLLGEHGFSLGHFPQSFEFATIGGFAATRSSGQDSAGYGRFNDMILGLRMITPVGVLD
LGRVPASAAGPDLRQLAIGSEGVFGVITRVRLRVHRIPESTRYEAWSFPDFATGVAALRTITQTGTGPTVVRLSDEAETG
VNLATTEAIGETQITGGCLGITVFEGTQEHTESRHAETRALLAARGGTSLGEGPARAWERGRFAAPYLRDSLLAAGALCE
TLETATVWSNTPVLKAAVTEALTTSLAASGTPALVMCHVSHVYPTGASLYFTVVAGQRGDPIEQWLAAKKAASDAIMATG
GTITHHHAVGSDHRPWMRAEVGDLGVTLLRTIKATLDPAGILNPGKLIP
>Mature_529_residues
MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARIVGTEYFRTADRDRLLHAGGK
STPDLLRRKDTGVQDAPDAVLLPGGPNGEDAVADILHYCSDHGIAVVPFGGGTSVVGGLDPVRNDFRAVISLDMRRFDRL
HRIDEVSGEAELEAGVTGPEAERLLGEHGFSLGHFPQSFEFATIGGFAATRSSGQDSAGYGRFNDMILGLRMITPVGVLD
LGRVPASAAGPDLRQLAIGSEGVFGVITRVRLRVHRIPESTRYEAWSFPDFATGVAALRTITQTGTGPTVVRLSDEAETG
VNLATTEAIGETQITGGCLGITVFEGTQEHTESRHAETRALLAARGGTSLGEGPARAWERGRFAAPYLRDSLLAAGALCE
TLETATVWSNTPVLKAAVTEALTTSLAASGTPALVMCHVSHVYPTGASLYFTVVAGQRGDPIEQWLAAKKAASDAIMATG
GTITHHHAVGSDHRPWMRAEVGDLGVTLLRTIKATLDPAGILNPGKLIP

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=575, Percent_Identity=28.1739130434783, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI37595756, Length=490, Percent_Identity=26.9387755102041, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI37595754, Length=514, Percent_Identity=25.875486381323, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI119964728, Length=198, Percent_Identity=32.3232323232323, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI48994907, Length=432, Percent_Identity=30.0925925925926, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1789351, Length=447, Percent_Identity=24.3847874720358, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17556096, Length=487, Percent_Identity=32.4435318275154, Blast_Score=267, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI17534361, Length=213, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320764, Length=451, Percent_Identity=24.6119733924612, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320027, Length=530, Percent_Identity=24.1509433962264, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320023, Length=172, Percent_Identity=34.8837209302326, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24653753, Length=483, Percent_Identity=30.4347826086957, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI18921117, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24639277, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24639275, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: 2.5.1.26

Molecular weight: Translated: 55770; Mature: 55770

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHH
VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGEDAVADILHYCS
HHHHHHHHCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC
DHGIAVVPFGGGTSVVGGLDPVRNDFRAVISLDMRRFDRLHRIDEVSGEAELEAGVTGPE
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHH
AERLLGEHGFSLGHFPQSFEFATIGGFAATRSSGQDSAGYGRFNDMILGLRMITPVGVLD
HHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
LGRVPASAAGPDLRQLAIGSEGVFGVITRVRLRVHRIPESTRYEAWSFPDFATGVAALRT
CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ITQTGTGPTVVRLSDEAETGVNLATTEAIGETQITGGCLGITVFEGTQEHTESRHAETRA
HHHCCCCCEEEEECCCCCCCCCEEEHHHCCCCEECCCEEEEEEECCCHHHHHHHHHHHHH
LLAARGGTSLGEGPARAWERGRFAAPYLRDSLLAAGALCETLETATVWSNTPVLKAAVTE
HHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ALTTSLAASGTPALVMCHVSHVYPTGASLYFTVVAGQRGDPIEQWLAAKKAASDAIMATG
HHHHHHHCCCCCEEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECC
GTITHHHAVGSDHRPWMRAEVGDLGVTLLRTIKATLDPAGILNPGKLIP
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWDAWGDPAAAKPLSDGVRSLLKQVVGLADSEQPELDPAQVQLRPSALSGADHDALARI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHH
VGTEYFRTADRDRLLHAGGKSTPDLLRRKDTGVQDAPDAVLLPGGPNGEDAVADILHYCS
HHHHHHHHCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC
DHGIAVVPFGGGTSVVGGLDPVRNDFRAVISLDMRRFDRLHRIDEVSGEAELEAGVTGPE
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHH
AERLLGEHGFSLGHFPQSFEFATIGGFAATRSSGQDSAGYGRFNDMILGLRMITPVGVLD
HHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
LGRVPASAAGPDLRQLAIGSEGVFGVITRVRLRVHRIPESTRYEAWSFPDFATGVAALRT
CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ITQTGTGPTVVRLSDEAETGVNLATTEAIGETQITGGCLGITVFEGTQEHTESRHAETRA
HHHCCCCCEEEEECCCCCCCCCEEEHHHCCCCEECCCEEEEEEECCCHHHHHHHHHHHHH
LLAARGGTSLGEGPARAWERGRFAAPYLRDSLLAAGALCETLETATVWSNTPVLKAAVTE
HHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ALTTSLAASGTPALVMCHVSHVYPTGASLYFTVVAGQRGDPIEQWLAAKKAASDAIMATG
HHHHHHHCCCCCEEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECC
GTITHHHAVGSDHRPWMRAEVGDLGVTLLRTIKATLDPAGILNPGKLIP
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 1-acyl-glycerone 3-phosphate; long-chain alcohol

Specific reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = an alkyl-glycerone 3-phosphate + a long-chain acid anion

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]