Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638121
Identifier: 121638121
GI number: 121638121
Start: 2489821
End: 2490297
Strand: Reverse
Name: 121638121
Synonym: BCG_2256c
Alternate gene names: NA
Gene position: 2490297-2489821 (Counterclockwise)
Preceding gene: 121638122
Following gene: 121638120
Centisome position: 56.93
GC content: 63.73
Gene sequence:
>477_bases ATGCCCATCGCGACGGTGTGCACATGGCCCGCGGAGACTGAAGGAGGTTCCACGGTGGTCGCGGCGGATCACGCCTCGAA CTACGCCCGCAAATTGGGCATCCAACGAGACCAACTTATCCAGGAATGGGGCTGGGACGAAGACACCGACGACGACATCC GCGCGGCCATCGAAGAAGCGTGCGGGGGAGAGTTGCTCGATGAAGACACCGACGAGGTCATCGATGTCGTCCTGTTGTGG TGGCGTGATGGCGACGGCGATTTGGTGGACACCCTGATGGATGCGATCGGCCCGCTCGCCGAGGACGGTGTGATTTGGGT GGTGACGCCCAAGACCGGCCAGCCCGGCCATGTATTGCCCGCCGAGATTGCCGAGGCGGCGCCCACAGCTGGGCTGATGC CGACCTCGTCGGTCAATCTGGGCAACTGGAGCGCCAGCAGATTGGTACAGCCGAAATCGCGGGCTGGCAAGCGCTGA
Upstream 100 bases:
>100_bases CGGGTTGATCGGCTCAACGACACCAAGACAAAGGCATTGAAAATGTGCGTGGCCGCCTTCTGAGGCGGGCGGGTGGACCG GTTCTGGCTGTGCGACGATA
Downstream 100 bases:
>100_bases TGCTGAACGTCGGAGCCACCGCCCCTGACTTCACGTTGCGCGACCAGAATCAGCAGCTTGTCACCCTGCGCGGCTACCGG GGTGCAAAGAACGTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLW WRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR
Sequences:
>Translated_158_residues MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLW WRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR >Mature_157_residues PIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEACGGELLDEDTDEVIDVVLLWW RDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLPAEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2239_MYCTU (P64959)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: C70778 - RefSeq: NP_216755.1 - RefSeq: NP_336769.1 - EnsemblBacteria: EBMYCT00000003955 - EnsemblBacteria: EBMYCT00000070472 - GeneID: 888451 - GeneID: 924126 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2299 - KEGG: mtu:Rv2239c - TIGR: MT2299 - TubercuList: Rv2239c - GeneTree: EBGT00050000017567 - HOGENOM: HBG292558 - OMA: VLLWWRE - ProtClustDB: CLSK872032 - InterPro: IPR021412
Pfam domain/function: PF11253 DUF3052
EC number: NA
Molecular weight: Translated: 16963; Mature: 16832
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA CCCCEEEECCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHH CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP CCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCH AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCC >Mature Secondary Structure PIATVCTWPAETEGGSTVVAADHASNYARKLGIQRDQLIQEWGWDEDTDDDIRAAIEEA CCCEEEECCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHH CGGELLDEDTDEVIDVVLLWWRDGDGDLVDTLMDAIGPLAEDGVIWVVTPKTGQPGHVLP CCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCH AEIAEAAPTAGLMPTSSVNLGNWSASRLVQPKSRAGKR HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036