Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is yuaR [C]
Identifier: 121638105
GI number: 121638105
Start: 2472481
End: 2474043
Strand: Reverse
Name: yuaR [C]
Synonym: BCG_2240c
Alternate gene names: 121638105
Gene position: 2474043-2472481 (Counterclockwise)
Preceding gene: 121638106
Following gene: 121638104
Centisome position: 56.56
GC content: 67.05
Gene sequence:
>1563_bases ATGGCGGCCATGTGGCGCCGCAGACCGTTGAGCTCGGCGCTGCTGTCCTTCGGGTTGCTGCTCGGCGGACTGCCCCTAGC AGCGCCCCCGTTGGCCGGCGCGACTGAAGAACCCGGCGCCGGCCAAACCCCGGGTGCGCCGGTCGTGGCGCCGCAACAGA GTTGGAACAGCTGCCGCGAGTTCATCGCCGACACCAGCGAAATTCGCACTGCACGCTGCGCGACGGTGTCCGTCCCCGTC GACTACGACCAACCCGGTGGGACACAAGCGAAGTTGGCGGTGATCCGCGTCCCCGCGACGGGACAGCGATTCGGAGCACT GCTGGTCAATCCTGGGGGACCCGGGGCGTCGGCGGTCGACATGGTCGCCGCTATGGCACCCGCGATCGCCGACACCGACA TTCTCCGCCACTTCGACCTGGTGGGCTTCGACCCGAGAGGGGTCGGCCACTCGACCCCTGCGTTGCGGTGTCGCACCGAC GCCGAGTTCGACGCGTACCGGCGCGATCCGATGGCCGACTACAGTCCGGCCGGTGTCACCCACGTCGAACAGGTCTACCG GCAGTTGGCCCAGGACTGTGTTGACCGGATGGGCTTCAGCTTCTTGGCCAATATCGGTACCGCGTCCGTCGCACGGGACA TGGACATGGTTCGCCAAGCGTTAGGTGACGATCAGATCAACTACCTCGGATACAGCTACGGCACCGAGTTGGGCACCGCT TACCTGGAACGGTTCGGTACTCATGTGCGGGCGATGGTCCTCGACGGCGCTATCGATCCAGCCGTTAGCCCAATCGAGGA AAGCATCAGCCAAATGGCGGGATTTCAGACCGCTTTCAATGACTACGCCGCCGACTGCGCCCGCTCGCCGGCCTGCCCTC TGGGCACCGACTCGGCCCAGTGGGTCAACCGCTACCACTCCCTGGTTGACCCGCTGGTGCAGAAGCCGGGTAAGACGTCG GATCCACGTGGCCTGAGCTACGCCGACGCGACGACGGGCACCATCAACGCGCTGTACAGCCCTCAGCGCTGGAAGTACCT GACCAGTGGTCTGCTGGGGCTGCAGCGCGGCAGCGACGCCGGCGACTTGCTGGTGCTTGCCGACGACTATGACGGCCGGG ATGCAGACGGGCACTACAGCAACGACCAGGACGCGTTCAACGCGGTCCGGTGCGTCGATGCGCCCACACCGGCCGATCCA GCGGCCTGGGTGGCCGCCGACCAACGGATCCGTCAGGTCGCCCCGTTCCTTAGCTACGGGCAGTTCACCGGATCCGCCCC CCGCGATCTGTGCGCGCTGTGGCCGGTGCCGGCAACGTCGACGCCGCACCCCGCGGCGCCGGCCGGGGCTGGCAAGGTCG TCGTGGTGTCCACCACCCACGACCCGGCCACTCCGTATCAGTCCGGGGTAGACCTGGCCCGCCAGCTGGGCGCACCGCTG ATCACCTTCGACGGCACCCAACACACTGCGGTGTTCGATGGCAACCAGTGTGTGGACTCTGCGGTGATGCACTATTTTCT CGACGGGACCTTGCCGCCGACGAGTCTGCGGTGCGCGCCCTGA
Upstream 100 bases:
>100_bases ATCGGCGGCACCACGCCGCCCAGCGGCGCCAAGTGCTAGCGGGGCGAAGAAACGAAGGTGTGATCATTTCGCGCCGTCAC AGGTATTCGCCGGTGAGACG
Downstream 100 bases:
>100_bases ACTCACCGCGCACTCCCCTTGCGGGCCGCCCCGCAACGCTTCTGGCCGGGCATCGGTAACACGGTTTTAACAGACAGTGC ATACTGTTCGAGGTATGGAC
Product: putative exported protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MAAMWRRRPLSSALLSFGLLLGGLPLAAPPLAGATEEPGAGQTPGAPVVAPQQSWNSCREFIADTSEIRTARCATVSVPV DYDQPGGTQAKLAVIRVPATGQRFGALLVNPGGPGASAVDMVAAMAPAIADTDILRHFDLVGFDPRGVGHSTPALRCRTD AEFDAYRRDPMADYSPAGVTHVEQVYRQLAQDCVDRMGFSFLANIGTASVARDMDMVRQALGDDQINYLGYSYGTELGTA YLERFGTHVRAMVLDGAIDPAVSPIEESISQMAGFQTAFNDYAADCARSPACPLGTDSAQWVNRYHSLVDPLVQKPGKTS DPRGLSYADATTGTINALYSPQRWKYLTSGLLGLQRGSDAGDLLVLADDYDGRDADGHYSNDQDAFNAVRCVDAPTPADP AAWVAADQRIRQVAPFLSYGQFTGSAPRDLCALWPVPATSTPHPAAPAGAGKVVVVSTTHDPATPYQSGVDLARQLGAPL ITFDGTQHTAVFDGNQCVDSAVMHYFLDGTLPPTSLRCAP
Sequences:
>Translated_520_residues MAAMWRRRPLSSALLSFGLLLGGLPLAAPPLAGATEEPGAGQTPGAPVVAPQQSWNSCREFIADTSEIRTARCATVSVPV DYDQPGGTQAKLAVIRVPATGQRFGALLVNPGGPGASAVDMVAAMAPAIADTDILRHFDLVGFDPRGVGHSTPALRCRTD AEFDAYRRDPMADYSPAGVTHVEQVYRQLAQDCVDRMGFSFLANIGTASVARDMDMVRQALGDDQINYLGYSYGTELGTA YLERFGTHVRAMVLDGAIDPAVSPIEESISQMAGFQTAFNDYAADCARSPACPLGTDSAQWVNRYHSLVDPLVQKPGKTS DPRGLSYADATTGTINALYSPQRWKYLTSGLLGLQRGSDAGDLLVLADDYDGRDADGHYSNDQDAFNAVRCVDAPTPADP AAWVAADQRIRQVAPFLSYGQFTGSAPRDLCALWPVPATSTPHPAAPAGAGKVVVVSTTHDPATPYQSGVDLARQLGAPL ITFDGTQHTAVFDGNQCVDSAVMHYFLDGTLPPTSLRCAP >Mature_519_residues AAMWRRRPLSSALLSFGLLLGGLPLAAPPLAGATEEPGAGQTPGAPVVAPQQSWNSCREFIADTSEIRTARCATVSVPVD YDQPGGTQAKLAVIRVPATGQRFGALLVNPGGPGASAVDMVAAMAPAIADTDILRHFDLVGFDPRGVGHSTPALRCRTDA EFDAYRRDPMADYSPAGVTHVEQVYRQLAQDCVDRMGFSFLANIGTASVARDMDMVRQALGDDQINYLGYSYGTELGTAY LERFGTHVRAMVLDGAIDPAVSPIEESISQMAGFQTAFNDYAADCARSPACPLGTDSAQWVNRYHSLVDPLVQKPGKTSD PRGLSYADATTGTINALYSPQRWKYLTSGLLGLQRGSDAGDLLVLADDYDGRDADGHYSNDQDAFNAVRCVDAPTPADPA AWVAADQRIRQVAPFLSYGQFTGSAPRDLCALWPVPATSTPHPAAPAGAGKVVVVSTTHDPATPYQSGVDLARQLGAPLI TFDGTQHTAVFDGNQCVDSAVMHYFLDGTLPPTSLRCAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR013595 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 55094; Mature: 54963
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMWRRRPLSSALLSFGLLLGGLPLAAPPLAGATEEPGAGQTPGAPVVAPQQSWNSCRE CCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHH FIADTSEIRTARCATVSVPVDYDQPGGTQAKLAVIRVPATGQRFGALLVNPGGPGASAVD HHHCHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH MVAAMAPAIADTDILRHFDLVGFDPRGVGHSTPALRCRTDAEFDAYRRDPMADYSPAGVT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCHH HVEQVYRQLAQDCVDRMGFSFLANIGTASVARDMDMVRQALGDDQINYLGYSYGTELGTA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH YLERFGTHVRAMVLDGAIDPAVSPIEESISQMAGFQTAFNDYAADCARSPACPLGTDSAQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH WVNRYHSLVDPLVQKPGKTSDPRGLSYADATTGTINALYSPQRWKYLTSGLLGLQRGSDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCC GDLLVLADDYDGRDADGHYSNDQDAFNAVRCVDAPTPADPAAWVAADQRIRQVAPFLSYG CCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QFTGSAPRDLCALWPVPATSTPHPAAPAGAGKVVVVSTTHDPATPYQSGVDLARQLGAPL CCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCE ITFDGTQHTAVFDGNQCVDSAVMHYFLDGTLPPTSLRCAP EEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAMWRRRPLSSALLSFGLLLGGLPLAAPPLAGATEEPGAGQTPGAPVVAPQQSWNSCRE CCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHH FIADTSEIRTARCATVSVPVDYDQPGGTQAKLAVIRVPATGQRFGALLVNPGGPGASAVD HHHCHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH MVAAMAPAIADTDILRHFDLVGFDPRGVGHSTPALRCRTDAEFDAYRRDPMADYSPAGVT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCHH HVEQVYRQLAQDCVDRMGFSFLANIGTASVARDMDMVRQALGDDQINYLGYSYGTELGTA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH YLERFGTHVRAMVLDGAIDPAVSPIEESISQMAGFQTAFNDYAADCARSPACPLGTDSAQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH WVNRYHSLVDPLVQKPGKTSDPRGLSYADATTGTINALYSPQRWKYLTSGLLGLQRGSDA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCC GDLLVLADDYDGRDADGHYSNDQDAFNAVRCVDAPTPADPAAWVAADQRIRQVAPFLSYG CCEEEEECCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QFTGSAPRDLCALWPVPATSTPHPAAPAGAGKVVVVSTTHDPATPYQSGVDLARQLGAPL CCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCE ITFDGTQHTAVFDGNQCVDSAVMHYFLDGTLPPTSLRCAP EEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]