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The map label for this gene is ydhO [C]

Identifier: 121638071

GI number: 121638071

Start: 2430645

End: 2431802

Strand: Reverse

Name: ydhO [C]

Synonym: BCG_2206c

Alternate gene names: 121638071

Gene position: 2431802-2430645 (Counterclockwise)

Preceding gene: 121638073

Following gene: 121638070

Centisome position: 55.59

GC content: 66.41

Gene sequence:

>1158_bases
TTGAGGCTCGACCAGAGGTGGTTGATCGCGCGTGTAATCATGCGGTCCGCCATAGGTTTCTTTGCGAGCTTCACCGTCTC
CTCCGGCGTCCTGGCCGCGAATGTGCTGGCTGATCCGGCCGACGACGCGCTGGCCAAGCTCAACGAGTTATCCCGGCAGG
CCGAGCAGACCACCGAGGCGCTGCACAGTGCGCAGCTGGATCTCAACGAAAAGCTCGCTGCCCAGCGGGCCGCCGACCAG
AAGCTTGCGGACAACAGAACGGCCTTGGATGCTGCGAGAGCACGCTTGGCGACTTTTCAGACGGCGGTGAACAAGGTCGC
GGCCGCTACCTACATGGGTGGTCGTACCCACGGCATGGATGCGATCCTGACGGCGGAGTCCCCGCAACTGTTGATCGATC
GGCTATCGGTACAGCGGGTGATGGCGCATCAAATGTCCACGCAGATGGCCCGTTTCAAGGCCGCTGGAGAACAGGCCGTC
AAGGCCGAGCAGGCTGCAGCCAAATCGGCGGCCGATGCCAGGTCCGCGGCCGAGCAAGCTGCCGCGGTACGAGCGAATCT
GCAGCACAAACAGAGCCAGCTGCAGGTGCAGATTGCCGTCGTCAAGTCGCAATACGTCGCGTTGACGCCGGAGGAGCGCA
CGGCCCTCGCTGATCCAGGACCGGTCCCGGCGGTTGCTGCGATCGCCCCCGGGGCCCCACCTGCGGCGTTGCCGCCCGGT
GCGCCGCCTGGCGACGGCCCGGCGCCTGGCGTGGCGCCGCCGCCTGGTGGGATGCCCGGATTGCCTTTCGTGCAGCCCGA
CGGCGCTGGCGGCGACCGTACGGCCGTTGTCCAAGCGGCGTTGACGCAGGTCGGCGCGCCCTACGCGTGGGGTGGTGCCG
CGCCCGGCGGGTTCGACTGCTCAGGCTTGGTGATGTGGGCGTTCCAGCAGGCTGGTATCGCGTTACCGCACTCCAGCCAG
GCGCTGGCTCACGGTGGTCAGCCGGTCGCGTTGTCGGATCTGCAGCCCGGCGACGTGTTGACCTTCTATTCCGACGCGTC
ACACGCAGGCATCTACATCGGTGATGGTCTTATGGTTCATTCCTCCACCTACGGTGTTCCGGTGCGGGTGGTGCCGATGG
ACTCGTCGGGGCCGATCTACGACGCCCGCCGTTACTGA

Upstream 100 bases:

>100_bases
AACTTCCCCTTTTGGACAATTCCGAGATCGTTTCGTAACCTGTTTGAGACCTAAACCAGCTCGACGTCATCCGTCGATGG
CCCGTTTAAGGAAGCAAATT

Downstream 100 bases:

>100_bases
CCGGCTCGTCGCGCGGCGGCTTTGCCCTCGGATCTTGCTGGCCTGTCTGTTTGTTGCGGAGCTGATTGGCGCGGCGGCCC
TGTCTGGTAATCCGGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKLAAQRAADQ
KLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAV
KAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAPPAALPPG
APPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAGIALPHSSQ
ALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY

Sequences:

>Translated_385_residues
MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKLAAQRAADQ
KLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAV
KAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAPPAALPPG
APPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAGIALPHSSQ
ALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY
>Mature_385_residues
MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEALHSAQLDLNEKLAAQRAADQ
KLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAV
KAEQAAAKSAADARSAAEQAAAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAPPAALPPG
APPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDCSGLVMWAFQQAGIALPHSSQ
ALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=101, Percent_Identity=33.6633663366337, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786421, Length=116, Percent_Identity=35.3448275862069, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2190_MYCTU (P67473)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   H70937
- RefSeq:   NP_216706.1
- RefSeq:   NP_336717.1
- ProteinModelPortal:   P67473
- SMR:   P67473
- MEROPS:   C40.006
- EnsemblBacteria:   EBMYCT00000002674
- EnsemblBacteria:   EBMYCT00000071359
- GeneID:   888670
- GeneID:   924181
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2245
- KEGG:   mtu:Rv2190c
- TIGR:   MT2245
- TubercuList:   Rv2190c
- GeneTree:   EBGT00050000015021
- HOGENOM:   HBG724925
- OMA:   NDSSALR
- ProtClustDB:   CLSK791688
- InterPro:   IPR000064

Pfam domain/function: PF00877 NLPC_P60

EC number: NA

Molecular weight: Translated: 39756; Mature: 39756

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHH
LHSAQLDLNEKLAAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMD
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
AILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAVKAEQAAAKSAADARSAAEQA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAPPAALPPG
HHHHHHHHHHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
APPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDC
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGLVMWAFQQAGIALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVH
CHHHHHHHHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCEEEECCEEEE
SSTYGVPVRVVPMDSSGPIYDARRY
CCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAANVLADPADDALAKLNELSRQAEQTTEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHH
LHSAQLDLNEKLAAQRAADQKLADNRTALDAARARLATFQTAVNKVAAATYMGGRTHGMD
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
AILTAESPQLLIDRLSVQRVMAHQMSTQMARFKAAGEQAVKAEQAAAKSAADARSAAEQA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVRANLQHKQSQLQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPGAPPAALPPG
HHHHHHHHHHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
APPGDGPAPGVAPPPGGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYAWGGAAPGGFDC
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGLVMWAFQQAGIALPHSSQALAHGGQPVALSDLQPGDVLTFYSDASHAGIYIGDGLMVH
CHHHHHHHHHCCCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCEEEECCEEEE
SSTYGVPVRVVPMDSSGPIYDARRY
CCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036