Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638043
Identifier: 121638043
GI number: 121638043
Start: 2402285
End: 2403151
Strand: Reverse
Name: 121638043
Synonym: BCG_2178c
Alternate gene names: NA
Gene position: 2403151-2402285 (Counterclockwise)
Preceding gene: 121638044
Following gene: 121638042
Centisome position: 54.94
GC content: 72.9
Gene sequence:
>867_bases ATGCTCGTCTCGCTCATGCAGTTCGTCACCGACCTGACCCCACCCCCGCAGTTGGTCGCGGTGTGGGCCGAGGAGCGCGG CTTCGCGGGCCTGTATGTGCCGGAGAAGACGCACGTGCCGATCAGCAGGAGCACGCCGTGGCCCGGTGGAGAGCTGCCGG ACTGGTATCGCCGCTGCTATGACCCGGTGGTGGCGCTGGCCGCCGCCGCGGCGGTCACGACGCGGCTGCGCGTGGGCACC GGGGCCTGCCTGGTGGCGGTGCATGATCCGATCCTGCTGGCCAAACAGATCGCCTCGCTGTGCGCCATGTCCGGCGAGCG GTTCGTGCTGGGGGTGGGTTTCGGGTGGAACGTGGAGGAGCTCGCCGACCACGGCGTGCCGTTCGCCGACCGGATCGCGG TGACGGTGGACAAGCTCGCCGCCATGCGGGCGCTATGGGCCGCAGAGCCGGTCCACTACGAGGGCACGCACGCGTCGGTG CCGCCGTCGTGGGCGTGGCCGAAACCGGCCGTGGCGCCGCCGGTGCTGTTCGGGTGCCGGCCCAGTGCGCGGGCGTTCGA GGTGATCGCCCGCCACGGCGACGGTTGGCAGCCGATCGAGGGGTACGGCGAGCTCCTGGGCGCGTTGCCGATGCTGCACG CCGCGTTCGAGCGTGCCGGGCGAGATCCGGCGACCGCCCAGGTCTGTGTGTACTCGTCGGCCGGCGACCCGGCGACCCTG CACGAGTACCGCCGGGCCGGTGTCGCGGAGGTGGCGCTCGCGCTGCCCTCGGCGGGCCGCGACCAGGTGCTGGCCGCCCT GGACCGGTCGGCCCCGCTGGTGGATGCGTTCGCCGGAGACGACCGGGAGGTCAAAAGCCATGCCTAG
Upstream 100 bases:
>100_bases CGGGCCCCGAGCGAGCGGTCACGCAATCCGGCATTGACAGCACGCCCCAGGCGGACCATCGTTAAACACGAACGTTCGTG CTTAATGAAAGCCGCCGCCG
Downstream 100 bases:
>100_bases CGCCGACGTCGGCCGCCAAACCCGGGCGCAGATCCTGCGCGCCGCGATGGATATCGCCTCGGTGAAGGGGCTCTCGGGGC TGTCCATCGGCGAGCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLVSLMQFVTDLTPPPQLVAVWAEERGFAGLYVPEKTHVPISRSTPWPGGELPDWYRRCYDPVVALAAAAAVTTRLRVGT GACLVAVHDPILLAKQIASLCAMSGERFVLGVGFGWNVEELADHGVPFADRIAVTVDKLAAMRALWAAEPVHYEGTHASV PPSWAWPKPAVAPPVLFGCRPSARAFEVIARHGDGWQPIEGYGELLGALPMLHAAFERAGRDPATAQVCVYSSAGDPATL HEYRRAGVAEVALALPSAGRDQVLAALDRSAPLVDAFAGDDREVKSHA
Sequences:
>Translated_288_residues MLVSLMQFVTDLTPPPQLVAVWAEERGFAGLYVPEKTHVPISRSTPWPGGELPDWYRRCYDPVVALAAAAAVTTRLRVGT GACLVAVHDPILLAKQIASLCAMSGERFVLGVGFGWNVEELADHGVPFADRIAVTVDKLAAMRALWAAEPVHYEGTHASV PPSWAWPKPAVAPPVLFGCRPSARAFEVIARHGDGWQPIEGYGELLGALPMLHAAFERAGRDPATAQVCVYSSAGDPATL HEYRRAGVAEVALALPSAGRDQVLAALDRSAPLVDAFAGDDREVKSHA >Mature_288_residues MLVSLMQFVTDLTPPPQLVAVWAEERGFAGLYVPEKTHVPISRSTPWPGGELPDWYRRCYDPVVALAAAAAVTTRLRVGT GACLVAVHDPILLAKQIASLCAMSGERFVLGVGFGWNVEELADHGVPFADRIAVTVDKLAAMRALWAAEPVHYEGTHASV PPSWAWPKPAVAPPVLFGCRPSARAFEVIARHGDGWQPIEGYGELLGALPMLHAAFERAGRDPATAQVCVYSSAGDPATL HEYRRAGVAEVALALPSAGRDQVLAALDRSAPLVDAFAGDDREVKSHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2161c and Rv3079c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019921 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 30768; Mature: 30768
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSLMQFVTDLTPPPQLVAVWAEERGFAGLYVPEKTHVPISRSTPWPGGELPDWYRRCY CHHHHHHHHHHCCCCHHEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH DPVVALAAAAAVTTRLRVGTGACLVAVHDPILLAKQIASLCAMSGERFVLGVGFGWNVEE HHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH LADHGVPFADRIAVTVDKLAAMRALWAAEPVHYEGTHASVPPSWAWPKPAVAPPVLFGCR HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC PSARAFEVIARHGDGWQPIEGYGELLGALPMLHAAFERAGRDPATAQVCVYSSAGDPATL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH HEYRRAGVAEVALALPSAGRDQVLAALDRSAPLVDAFAGDDREVKSHA HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHCCCCCHHCCCC >Mature Secondary Structure MLVSLMQFVTDLTPPPQLVAVWAEERGFAGLYVPEKTHVPISRSTPWPGGELPDWYRRCY CHHHHHHHHHHCCCCHHEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH DPVVALAAAAAVTTRLRVGTGACLVAVHDPILLAKQIASLCAMSGERFVLGVGFGWNVEE HHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH LADHGVPFADRIAVTVDKLAAMRALWAAEPVHYEGTHASVPPSWAWPKPAVAPPVLFGCR HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC PSARAFEVIARHGDGWQPIEGYGELLGALPMLHAAFERAGRDPATAQVCVYSSAGDPATL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH HEYRRAGVAEVALALPSAGRDQVLAALDRSAPLVDAFAGDDREVKSHA HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]