Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PPE36
Identifier: 121637990
GI number: 121637990
Start: 2347806
End: 2348537
Strand: Direct
Name: PPE36
Synonym: BCG_2125
Alternate gene names: 121637990
Gene position: 2347806-2348537 (Clockwise)
Preceding gene: 121637989
Following gene: 121637995
Centisome position: 53.67
GC content: 58.61
Gene sequence:
>732_bases ATGCCCAATTTCTGGGCGTTGCCGCCCGAGATCAACTCCACCCGGATATATCTCGGCCCGGGTTCTGGCCCGATACTGGC CGCCGCCCAGGGATGGAACGCTCTGGCCAGTGAGCTGGAAAAGACGAAGGTGGGGTTGCAGTCAGCGCTCGACACGTTGC TGGAGTCGTATAGGGGTCAGTCGTCGCAGGCTTTGATACAGCAGACCTTGCCGTATGTGCAGTGGCTGACCACGACCGCC GAGCACGCCCATAAGACCGCGATCCAGCTCACGGCAGCGGCGAACGCCTACGAGCAGGCTAGAGCGGCGATGGTGCCGCC GGCGATGGTGCGCGCGAACCGCGTGCAGACCACAGTGTTGAAGGCAATCAACTGGTTCGGGCAATTCTCCACCAGGATCG CCGACAAGGAGGCCGACTACGAACAGATGTGGTTCCAAGACGCGCTAGTGATGGAGAACTATTGGGAAGCCGTGCAAGAG GCGATACAGTCGACGTCGCATTTTGAGGATCCACCGGAGATGGCCGACGACTACGACGAGGCCTGGATGCTCAACACCGT GTTCGACTATCACAACGAGAACGCAAAAGAGGAGGTCATCCATCTCGTGCCCGACGTGAACAAGGAGAGGGGGCCCATCG AACTCGTAACCAAGGTAGACAAAGAGGGGACCATCAGACTCGTCTACGATGGGGAGCCCACGTTTTCATACAAGGAACAT CCTAAGTTTTGA
Upstream 100 bases:
>100_bases CTTGCGTATGAGGAAGTCGAGATCGCCAACAACGAAGGTTTCTAACGTGTCGCCAGTTACGCACGAGTGGCTACCAGCGA GTACAAGGGAGTAACGAATT
Downstream 100 bases:
>100_bases TTCGGGAACATCCTAAGAAACGGGGGGCGTCGCCGTTGGAGACGTCGCAACGTGTCCGCAGTCCCAAGGGCAACAGTGAA GGGCCCACGGTGCGATCCCC
Product: PPE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTA EHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQE AIQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH PKF
Sequences:
>Translated_243_residues MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTA EHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQE AIQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH PKF >Mature_242_residues PNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSSQALIQQTLPYVQWLTTTAE HAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEA IQSTSHFEDPPEMADDYDEAWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEHP KF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPE36_MYCTU (P95315)
Other databases:
- EMBL: U88049 - EMBL: BX842578 - EMBL: AE000516 - PIR: G70511 - RefSeq: NP_336636.1 - RefSeq: YP_177859.1 - HSSP: Q79FE1 - ProteinModelPortal: P95315 - SMR: P95315 - EnsemblBacteria: EBMYCT00000001693 - EnsemblBacteria: EBMYCT00000070009 - GeneID: 887814 - GeneID: 924542 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2167 - KEGG: mtu:Rv2108 - TIGR: MT2167 - TubercuList: Rv2108 - GeneTree: EBGT00050000014888 - HOGENOM: HBG571146 - ProtClustDB: CLSK799875 - InterPro: IPR000030
Pfam domain/function: PF00823 PPE
EC number: NA
Molecular weight: Translated: 27480; Mature: 27349
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ CCCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHH AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHEECCCCCCEEEEECCCCCCCCCCC PKF CCC >Mature Secondary Structure PNFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQ CCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSQALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KAINWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMADDYDE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHH AWMLNTVFDYHNENAKEEVIHLVPDVNKERGPIELVTKVDKEGTIRLVYDGEPTFSYKEH HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHEECCCCCCEEEEECCCCCCCCCCC PKF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10970728; 9634230; 12218036