Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is tatC
Identifier: 121637978
GI number: 121637978
Start: 2333558
End: 2334484
Strand: Reverse
Name: tatC
Synonym: BCG_2113c
Alternate gene names: 121637978
Gene position: 2334484-2333558 (Counterclockwise)
Preceding gene: 121637979
Following gene: 121637977
Centisome position: 53.37
GC content: 63.11
Gene sequence:
>927_bases GTGCGCGCCGCCGGTCTTCTCAAACGGCTCAACCCACGTAACAGGCGCAGCCGCGTCAATCCTGACGCGACGATGTCGCT GGTCGACCACCTGACCGAGTTACGCACCAGGTTGCTGATCTCCCTGGCCGCGATCTTGGTCACCACAATCTTCGGGTTCG TCTGGTATTCGCATTCGATTTTCGGGTTGGACAGCCTCGGAGAGTGGCTGCGGCATCCCTACTGTGCCCTGCCGCAGTCG GCCCGGGCGGATATCAGCGCCGACGGAGAGTGCCGTTTGTTGGCCACCGCGCCGTTCGACCAGTTCATGTTGCGGCTCAA GGTCGGGATGGCCGCCGGCATTGTGCTGGCTTGCCCGGTGTGGTTCTACCAGCTGTGGGCGTTCATCACGCCTGGTCTCT ACCAGAGGGAGCGCCGCTTCGCGGTGGCCTTCGTGATCCCAGCAGCGGTGCTGTTCGTCGCCGGTGCCGTACTGGCCTAC CTGGTGTTGTCCAAGGCGTTGGGCTTTTTGTTGACCGTCGGCAGCGACGTGCAGGTGACCGCGCTGTCTGGCGACCGCTA CTTTGGCTTTCTGCTCAACCTGCTGGTGGTGTTCGGGGTCAGCTTCGAATTCCCCCTGCTGATCGTGATGCTGAACCTGG CGGGCCTGCTGACCTATGAGCGGCTCAAGTCTTGGCGGCGCGGGTTGATCTTTGCGATGTTCGTCTTCGCGGCGATCTTC ACGCCCGGATCCGATCCGTTCTCGATGACCGCGCTCGGTGCGGCGTTGACCGTGCTGCTAGAGCTCGCCATTCAGATCGC CCGCGTGCATGACAAGCGAAAAGCCAAGCGCGAAGCCGCGATTCCCGACGACGAAGCTTCGGTCATCGACCCGCCCTCGC CGGTGCCGGCGCCATCGGTCATCGGATCTCATGACGACGTCACGTAG
Upstream 100 bases:
>100_bases GAGACCCCCACGCCGGTGCAATCGCAGCGTGTCGACCCCTCAGCGGCGTCTGGTCAAGACAGCACCGAGGCTCGGCCGGC TTAGCTCGGGCGTCGCTTCA
Downstream 100 bases:
>100_bases GCCCGCTAGCCGCGAGCGGGCGCGGTCAACTGGCGAGGCGGCGGCGACGTGACTGAGCTGGCCGAGCTGGACCGGTTCAC CGCGGAACTACCGTTCTCGC
Product: putative Sec-independent protein translocase transmembrane protein tatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRAAGLLKRLNPRNRRSRVNPDATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQS ARADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFAVAFVIPAAVLFVAGAVLAY LVLSKALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGVSFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIF TPGSDPFSMTALGAALTVLLELAIQIARVHDKRKAKREAAIPDDEASVIDPPSPVPAPSVIGSHDDVT
Sequences:
>Translated_308_residues MRAAGLLKRLNPRNRRSRVNPDATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQS ARADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFAVAFVIPAAVLFVAGAVLAY LVLSKALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGVSFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIF TPGSDPFSMTALGAALTVLLELAIQIARVHDKRKAKREAAIPDDEASVIDPPSPVPAPSVIGSHDDVT >Mature_308_residues MRAAGLLKRLNPRNRRSRVNPDATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQS ARADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFAVAFVIPAAVLFVAGAVLAY LVLSKALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGVSFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIF TPGSDPFSMTALGAALTVLLELAIQIARVHDKRKAKREAAIPDDEASVIDPPSPVPAPSVIGSHDDVT
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family
Homologues:
Organism=Escherichia coli, GI2367313, Length=268, Percent_Identity=32.089552238806, Blast_Score=114, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATC_MYCBO (P66896)
Other databases:
- EMBL: BX248341 - RefSeq: NP_855769.1 - EnsemblBacteria: EBMYCT00000015098 - GeneID: 1091141 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2120c - GeneTree: EBGT00050000016575 - HOGENOM: HBG733232 - OMA: TDINNYL - ProtClustDB: CLSK791624 - BioCyc: MBOV233413:MB2120C-MONOMER - InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 - PRINTS: PR01840 - TIGRFAMs: TIGR00945
Pfam domain/function: PF00902 TatC
EC number: NA
Molecular weight: Translated: 33855; Mature: 33855
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x168aafb4)-; HASH(0x1477fea0)-; HASH(0x16579450)-; HASH(0x15acd7d0)-; HASH(0x16a35850)-; HASH(0x16a92010)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAGLLKRLNPRNRRSRVNPDATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSI CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDSLGEWLRHPYCALPQSARADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPV CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH WFYQLWAFITPGLYQRERRFAVAFVIPAAVLFVAGAVLAYLVLSKALGFLLTVGSDVQVT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ALSGDRYFGFLLNLLVVFGVSFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIF EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPGSDPFSMTALGAALTVLLELAIQIARVHDKRKAKREAAIPDDEASVIDPPSPVPAPSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC IGSHDDVT CCCCCCCH >Mature Secondary Structure MRAAGLLKRLNPRNRRSRVNPDATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSI CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDSLGEWLRHPYCALPQSARADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPV CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH WFYQLWAFITPGLYQRERRFAVAFVIPAAVLFVAGAVLAYLVLSKALGFLLTVGSDVQVT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ALSGDRYFGFLLNLLVVFGVSFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIF EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPGSDPFSMTALGAALTVLLELAIQIARVHDKRKAKREAAIPDDEASVIDPPSPVPAPSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC IGSHDDVT CCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972