Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637938
Identifier: 121637938
GI number: 121637938
Start: 2294565
End: 2296169
Strand: Reverse
Name: 121637938
Synonym: BCG_2071c
Alternate gene names: NA
Gene position: 2296169-2294565 (Counterclockwise)
Preceding gene: 121637939
Following gene: 121637937
Centisome position: 52.49
GC content: 71.21
Gene sequence:
>1605_bases GTGAGCCAGATTCCCGTCAAACTCCTGGTCAACGGCCGGGTGTACAGCCCCACCCACCCCGAAGCCACCGCGATGGCGGT GCGCGGCGATGTCGTCGCCTGGTTGGGCAGCGACGACGTCGGCCGCGACCAGTTCCCAGACGCTGACGTGCAGGATCTCG ACGGCCGATTCGTGGCGCCGGGGTTCGTGGACAGCCACATCCACCTGACCGCGACCGGTCTGATGCTCAGCGGGCTGGAC TTGCGGCCCGCGACCTCACGCGCGCAGTGCCTACGGATGGTCGCCGACTATGCGGCCGACCATCCGGGTCAGCCGCTGTG GGGTCACGGTTGGGATGAGTCGGCCTGGCCGGAGAATGCTGCGCCCAGCACCGCCGACCTAGACGCGGTTCTCGGTGACT GTCCCGCCTACCTGGCCAGGATCGACTCGCACTCCGCGTTGGTCTCCTCCGGACTGCGGCGGCTGGTCCCCGAGCTGGCG GCGGCAACCGGTTACACGGCCCAGCGGCCGCTGACCGGTGATGCCCACCACCTAGCCCGGGCCGCCGCACGCTACCTCTT GACCGACGTCCAGCTTGCCGACGCCCGGGCCGTGGCGCTGCAGGCCATAGCCGCGGCCGGCGTCGTCGCCGTGCACGAAT GCGCCGGTCCGGAAATCGGCGGGCTCGACGACTGGTTGCGGCTGCGTGCACTCGAGCACGGAGTCGAGGTGATCGGGTAC TGGGGTGAGGCCGTGGCCACGCCGGCCCAGGCCCGTGACCTGGTGACCGAGACCGGGGCTCGAGGGCTGGCCGGTGATTT GTTCGTCGACGGGGCGCTCGGGTCGCGCACCGCCTGGCTGCACGAGCCCTACGCGGACGCCCCCGACTGCATCGGCACCT GCCACCTTGACGTAGACGGCATCGAAGCGCACGTACGAGCATGCACCAAGGCCGAAGTGACCGCCGGCTTCCACGTCATC GGCGACGCTGCGGTGTCGGCCGCAGTCGCCGCCTTCGAACGGGTGGTGGCAGATCTCGGCGTGGTTGCCGTCGCCCGCTG CGGCCACCGCCTCGAGCATGTGGAGATGGTCACCGCGGACCAGGCCGCGAAGCTGGGCGCTTGGGGGGTCATCGCCAGTG TGCAGCCCAACTTCGATGAGCTGTGGGGCGGTGGCGACGGCATGTACGCTCGCCGCCTGGGCGCCCAGCGAGGCAGCGAA CTCAACCCGCTGGCGCTGTTAGCATCCCAAGGCGTGCCCCTCGCGCTTGGCTCCGACGCGCCCGTCACGGGCTTTGATCC CTGGGCCAGCGTGCGCGCGGCGGTCAATCACCGCACGCCGGGCAGCGGGGTATCGGCGCGGGCGGCGTTTGCTGCCGCGA CCCGCGGCGGCTGGCGGGCCGGTGGTGTTCGAGACGGCCGGATCGGCACCCTGGTGCCCGGCGCGCCCGCGTCCTACGCG ATATGGGACGCCGGGGACTTTGACGTCGACGCACCGCGCGACGCAGTCCAGCGCTGGTCTACCGACCCGCGCTCCCGGGT ACCCGCATTGCCGCGGCTGGGCCCGACCGACGCCTTGCCGCGTTGCCGCCAAACCGTGCATCGAGGTGCGGTCATCTATG GCTAG
Upstream 100 bases:
>100_bases ATTGATGGCGAGGTCATCGACGTCATAGATGTCGAGCCGTTGACCCTTCAGCCCCCTCGGGTAGCCGCAGAACCTCCATC GCCGGGGTCGAATTAGCGGT
Downstream 100 bases:
>100_bases GGAATGGTTCGGCCGGAAGGCGCGGCCCGCTGAGGTCGCCGAGGCCGGCCCGGAGAGCCCCGCCGATCCAGAGATCGAAC TGTCGGCCGAGCCGGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase; Exos Regulatory Protein AepA; Metal-Dependent Hydrolase With TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidase; Metal Dependent Amidohydrolase Superfamily Protein; Metal-Dependent Amidohydrolase With TIM-Barrel Fold; Metal-Dependent Glycoprotease; Metallo-Dependent Hydrolase; Metal-Dependent Amidohydrolase With TIM-Barrel Fold Protein; Exo Regulatory Protein Aepa; Metal-Dependant Glycoprotease; Tim-Barrel Fold Metal-Dependent Hydrolase; Exo Regulatory Protein AepA; LOW QUALITY PROTEIN Amidohydrolase; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MSQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAPGFVDSHIHLTATGLMLSGLD LRPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENAAPSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELA AATGYTAQRPLTGDAHHLARAAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGY WGEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDGIEAHVRACTKAEVTAGFHVI GDAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTADQAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSE LNPLALLASQGVPLALGSDAPVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYA IWDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG
Sequences:
>Translated_534_residues MSQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAPGFVDSHIHLTATGLMLSGLD LRPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENAAPSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELA AATGYTAQRPLTGDAHHLARAAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGY WGEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDGIEAHVRACTKAEVTAGFHVI GDAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTADQAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSE LNPLALLASQGVPLALGSDAPVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYA IWDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG >Mature_533_residues SQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAPGFVDSHIHLTATGLMLSGLDL RPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENAAPSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELAA ATGYTAQRPLTGDAHHLARAAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGYW GEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDGIEAHVRACTKAEVTAGFHVIG DAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTADQAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSEL NPLALLASQGVPLALGSDAPVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYAI WDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG
Specific function: Unknown
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55854; Mature: 55723
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAP CCCCCEEEEECCEEECCCCCCHHEEEECCCEEEEECCCCCCCCCCCCCCHHHCCCCEECC GFVDSHIHLTATGLMLSGLDLRPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENA CCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELAAATGYTAQRPLTGDAHHLAR CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEEE WGEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDG CCHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCH IEAHVRACTKAEVTAGFHVIGDAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTAD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSELNPLALLASQGVPLALGSDA HHHHCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECCCC PVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYA CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEE IWDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG EECCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEECC >Mature Secondary Structure SQIPVKLLVNGRVYSPTHPEATAMAVRGDVVAWLGSDDVGRDQFPDADVQDLDGRFVAP CCCCEEEEECCEEECCCCCCHHEEEECCCEEEEECCCCCCCCCCCCCCHHHCCCCEECC GFVDSHIHLTATGLMLSGLDLRPATSRAQCLRMVADYAADHPGQPLWGHGWDESAWPENA CCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APSTADLDAVLGDCPAYLARIDSHSALVSSGLRRLVPELAAATGYTAQRPLTGDAHHLAR CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AAARYLLTDVQLADARAVALQAIAAAGVVAVHECAGPEIGGLDDWLRLRALEHGVEVIGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEEE WGEAVATPAQARDLVTETGARGLAGDLFVDGALGSRTAWLHEPYADAPDCIGTCHLDVDG CCHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCH IEAHVRACTKAEVTAGFHVIGDAAVSAAVAAFERVVADLGVVAVARCGHRLEHVEMVTAD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QAAKLGAWGVIASVQPNFDELWGGGDGMYARRLGAQRGSELNPLALLASQGVPLALGSDA HHHHCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECCCC PVTGFDPWASVRAAVNHRTPGSGVSARAAFAAATRGGWRAGGVRDGRIGTLVPGAPASYA CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEE IWDAGDFDVDAPRDAVQRWSTDPRSRVPALPRLGPTDALPRCRQTVHRGAVIYG EECCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA