Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637908
Identifier: 121637908
GI number: 121637908
Start: 2246920
End: 2247597
Strand: Reverse
Name: 121637908
Synonym: BCG_2041c
Alternate gene names: NA
Gene position: 2247597-2246920 (Counterclockwise)
Preceding gene: 121637909
Following gene: 121637907
Centisome position: 51.38
GC content: 48.08
Gene sequence:
>678_bases ATGGTTCAACGCTATCCTTTTAGGATGGTTCAACGAACGCCAGCGATGACAAGCGTCGCTCAGCTAGAGCACTATCTAGA GGAGCACTTGACCAAAGAGCTGGCATGGTTATTGCGTGCTGCAACAGAATGGCACGCGCAACATTGTATGAATCTTGGGA TTGACGGCTATAGCATGCAGGTCTACGCACTCGATTCGACTGTGCTGCACGCCCGGACGCTGTTTGAATTCTTCACGCAG AATACAAGCGTAGGACAAAACGCGAATTACTACAATTGCACTGTGTACAAGGTACCGCTTATCGGATCGATCTTGTATCA ATTTCACTGGAGAAGGCCGATTCATAGTCATATGATGCACGCGCAAGATAGGCGGCCGGTTACACAGTTACCAACATATG ACGACCACGCGCAAACAAAACCGTTGAATGAGATGCCGGTGGACTTTGCCAAAGAGATAGTACGTTTGTGGCGCGTGTTC GTCAAAGATTTAAATAATCATACAAATTTACAGTTTCGGCCAATCGGCGCTACAGCACAGACGGCGTTAGCATCTGAAAT CAATGCCGCTAAAAGAGTCCGTACAAATGACGTTACGCAACGTCAGATCGCTGTCGGAAAGGAAACGAGCAGGCTGGAAC CGAATTTTTCGATTCCGCAGATTGAATGGCCTGCCTAG
Upstream 100 bases:
>100_bases TTGTGCGCGAGGGCGCGCAGCAGATGCTGGCCGGGGCCCAACGGCGCTGCGCAGCTTCCAAATTAGTTAGGCAGCGCCAT GAAACCGCTATCCTTTTAGG
Downstream 100 bases:
>100_bases ACTAGGCCTTCAGTAAGCGTGTCGGCCGGGTAGGAGAGGCCAAAGGCCTTACCCTGGCTGGGTTTGCGACCTCAACACAG CCCAGCAGGAAAGGCCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVQRYPFRMVQRTPAMTSVAQLEHYLEEHLTKELAWLLRAATEWHAQHCMNLGIDGYSMQVYALDSTVLHARTLFEFFTQ NTSVGQNANYYNCTVYKVPLIGSILYQFHWRRPIHSHMMHAQDRRPVTQLPTYDDHAQTKPLNEMPVDFAKEIVRLWRVF VKDLNNHTNLQFRPIGATAQTALASEINAAKRVRTNDVTQRQIAVGKETSRLEPNFSIPQIEWPA
Sequences:
>Translated_225_residues MVQRYPFRMVQRTPAMTSVAQLEHYLEEHLTKELAWLLRAATEWHAQHCMNLGIDGYSMQVYALDSTVLHARTLFEFFTQ NTSVGQNANYYNCTVYKVPLIGSILYQFHWRRPIHSHMMHAQDRRPVTQLPTYDDHAQTKPLNEMPVDFAKEIVRLWRVF VKDLNNHTNLQFRPIGATAQTALASEINAAKRVRTNDVTQRQIAVGKETSRLEPNFSIPQIEWPA >Mature_225_residues MVQRYPFRMVQRTPAMTSVAQLEHYLEEHLTKELAWLLRAATEWHAQHCMNLGIDGYSMQVYALDSTVLHARTLFEFFTQ NTSVGQNANYYNCTVYKVPLIGSILYQFHWRRPIHSHMMHAQDRRPVTQLPTYDDHAQTKPLNEMPVDFAKEIVRLWRVF VKDLNNHTNLQFRPIGATAQTALASEINAAKRVRTNDVTQRQIAVGKETSRLEPNFSIPQIEWPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26193; Mature: 26193
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQRYPFRMVQRTPAMTSVAQLEHYLEEHLTKELAWLLRAATEWHAQHCMNLGIDGYSMQ CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VYALDSTVLHARTLFEFFTQNTSVGQNANYYNCTVYKVPLIGSILYQFHWRRPIHSHMMH EEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHH AQDRRPVTQLPTYDDHAQTKPLNEMPVDFAKEIVRLWRVFVKDLNNHTNLQFRPIGATAQ HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH TALASEINAAKRVRTNDVTQRQIAVGKETSRLEPNFSIPQIEWPA HHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVQRYPFRMVQRTPAMTSVAQLEHYLEEHLTKELAWLLRAATEWHAQHCMNLGIDGYSMQ CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VYALDSTVLHARTLFEFFTQNTSVGQNANYYNCTVYKVPLIGSILYQFHWRRPIHSHMMH EEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCHHHHHHH AQDRRPVTQLPTYDDHAQTKPLNEMPVDFAKEIVRLWRVFVKDLNNHTNLQFRPIGATAQ HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH TALASEINAAKRVRTNDVTQRQIAVGKETSRLEPNFSIPQIEWPA HHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA