Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637905
Identifier: 121637905
GI number: 121637905
Start: 2245457
End: 2245762
Strand: Reverse
Name: 121637905
Synonym: BCG_2038c
Alternate gene names: NA
Gene position: 2245762-2245457 (Counterclockwise)
Preceding gene: 121637906
Following gene: 121637904
Centisome position: 51.34
GC content: 63.4
Gene sequence:
>306_bases ATGGCGATGACACTACGGGACATGGACGCCGTACGTCCCGTTAACCGGGAGGCGGTGGACCGGCACAAGGCACGAATGCG CGATGAAGTGCGGGCATTCCGGCTCCGGGAGCTGCGCGCGGCTCAGTCACTCACCCAGGTCCAGGTGGCTGCGCTGGCGC ACATCCGGCAGAGCCGGGTATCCAGCATCGAGAACGGCGACATCGGCTCCGCACAGGTCAACACACTGCGCAAATACGTG TCCGCTCTTGGCGGAGAACTGGATATCACCGTCCGCCTGGGAGATGAGACATTCACCCTGGCATAG
Upstream 100 bases:
>100_bases AGAAGATCAAAGCGGCCGATGAGATGTTTGCCGAACATCTCGCACAGTTCGAGGACACGAAGCCAAAGAGGCGCAAGCGC AAGAAAGGGTAAGTGGCACG
Downstream 100 bases:
>100_bases AGGCACAAACCGTTCTCGCCGTTCTTGGCCGGATACGAACCACCGACGGCCCTCCGTTGGTCGAGATGACCGCGAGACCT GCCGGTGGCGCCGGGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Xre Family xin-Antitoxin System Antitoxin Component
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MAMTLRDMDAVRPVNREAVDRHKARMRDEVRAFRLRELRAAQSLTQVQVAALAHIRQSRVSSIENGDIGSAQVNTLRKYV SALGGELDITVRLGDETFTLA
Sequences:
>Translated_101_residues MAMTLRDMDAVRPVNREAVDRHKARMRDEVRAFRLRELRAAQSLTQVQVAALAHIRQSRVSSIENGDIGSAQVNTLRKYV SALGGELDITVRLGDETFTLA >Mature_100_residues AMTLRDMDAVRPVNREAVDRHKARMRDEVRAFRLRELRAAQSLTQVQVAALAHIRQSRVSSIENGDIGSAQVNTLRKYVS ALGGELDITVRLGDETFTLA
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11292; Mature: 11161
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMTLRDMDAVRPVNREAVDRHKARMRDEVRAFRLRELRAAQSLTQVQVAALAHIRQSRV CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIENGDIGSAQVNTLRKYVSALGGELDITVRLGDETFTLA HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECC >Mature Secondary Structure AMTLRDMDAVRPVNREAVDRHKARMRDEVRAFRLRELRAAQSLTQVQVAALAHIRQSRV CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIENGDIGSAQVNTLRKYVSALGGELDITVRLGDETFTLA HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA