Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637901
Identifier: 121637901
GI number: 121637901
Start: 2242650
End: 2243690
Strand: Direct
Name: 121637901
Synonym: BCG_2034
Alternate gene names: NA
Gene position: 2242650-2243690 (Clockwise)
Preceding gene: 121637900
Following gene: 121637902
Centisome position: 51.27
GC content: 63.78
Gene sequence:
>1041_bases ATGAACGGCCTGGGAGACGTGCTCGCGGTCGCCCGGAAGGCTCGTGGACTCACCCAGATCGAATTGGCCGAGCTGGTGGG ACTCACCCAGCCGGCGATCAACCGGTACGAATCAGGCGACCGTGACCCCGACCAACACATCGTGGCCAAGCTGGCCGAAA TCCTCGGTGTGACCGACGATCTGCTCATACACGGGAACAGGTTTCGAGGTGCGCTCGCAGTCGATGCGCATATGCGCCGC CACAAGACCACGAAGGCGTCGGCCTGGCGTCAGCTGGAGGCCCGGTTGAACCTGTTGCGCGTGCACGCGTCATTCCTCTT CGAGGAAGTGGCTATCAATAGCGAGCAACATGTGCCCGCGTTCGACCCGGAGTTCACCGCCGCCGAGGACGCCGCCCGGT TAGTCCGTGCCCAGTGGCGCATGCCGATGGGCCCGGTCGTCAACCTGACCCGGTGGATGGAGGCCGCGGGCTGCCTGGTG TTCGAAGAGGACTTCGCCACCCAGCGCATCGACGGGTTGTCGCAGTGGGTCGACGACTACCCCGTCATGCTGATCAACGC CAACGCAGCACCCGACCGAAAACGCTTGACCCTTGCCCACGAACTCGGCCACCTCGTGCTGCATTCCACCAACCCCACGG AGAACATGGAGACCGAAGCCACCGCCTTCGCCGCCGAGTTTCTCATGCCCGAGAGCGAGATTCGGCCCGAGCTGCGTCGG CTCGATCTCGGCAAGTTGCTCGAACTGAAACGGGAATGGGGCGTCTCGATGCAAGCCCTCCTGGAGCGGGCATATCGCAT GGGCCTGGTATCGGCCGAGGCTCGCACCAAGCTCTACAAGGCGATGAACGCGCGCGGCTGGAAAACCAAAGAGCCAGGCA TCGAGTCCATCGTGCGAGAAAAACCGAGCCTACCCGCCCACATCGGCATGACACTCCGAAGCCGCGGATTCACCGACCAG CAAGCCGCCGCCATCGCCGGATACGCCAATCCTGCGGACAATCCATTCCGCCCCGAAGGTGGCCGCCTCCATGCGATTTG A
Upstream 100 bases:
>100_bases CTGCGGCCGGCGTGAAGATCACCTGGACCCCGATCGAGCCGACACTACCGTCCATCGACTTCGGTGACTTGGGTGAAGAC TCTGGAGCATCGGGGGAACG
Downstream 100 bases:
>100_bases CTTCCGATTGACGCTGGGTTGTCATGCCGACGGCGCCAGGTGCGGTCACACAAGGCGGCCGGAACAGGCATCGATTCTTG GCGACGCCGTTGCTGTACCG
Product: regulatory protein
Products: NA
Alternate protein names: Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator HTH_3 Family; HTH Domain-Containing Protein; Conserved Domain Protein; Zn Peptidase; Transcription Regulator; XRE Family Transcriptional Regulator; Regulatory Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNGLGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGVTDDLLIHGNRFRGALAVDAHMRR HKTTKASAWRQLEARLNLLRVHASFLFEEVAINSEQHVPAFDPEFTAAEDAARLVRAQWRMPMGPVVNLTRWMEAAGCLV FEEDFATQRIDGLSQWVDDYPVMLINANAAPDRKRLTLAHELGHLVLHSTNPTENMETEATAFAAEFLMPESEIRPELRR LDLGKLLELKREWGVSMQALLERAYRMGLVSAEARTKLYKAMNARGWKTKEPGIESIVREKPSLPAHIGMTLRSRGFTDQ QAAAIAGYANPADNPFRPEGGRLHAI
Sequences:
>Translated_346_residues MNGLGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGVTDDLLIHGNRFRGALAVDAHMRR HKTTKASAWRQLEARLNLLRVHASFLFEEVAINSEQHVPAFDPEFTAAEDAARLVRAQWRMPMGPVVNLTRWMEAAGCLV FEEDFATQRIDGLSQWVDDYPVMLINANAAPDRKRLTLAHELGHLVLHSTNPTENMETEATAFAAEFLMPESEIRPELRR LDLGKLLELKREWGVSMQALLERAYRMGLVSAEARTKLYKAMNARGWKTKEPGIESIVREKPSLPAHIGMTLRSRGFTDQ QAAAIAGYANPADNPFRPEGGRLHAI >Mature_346_residues MNGLGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGVTDDLLIHGNRFRGALAVDAHMRR HKTTKASAWRQLEARLNLLRVHASFLFEEVAINSEQHVPAFDPEFTAAEDAARLVRAQWRMPMGPVVNLTRWMEAAGCLV FEEDFATQRIDGLSQWVDDYPVMLINANAAPDRKRLTLAHELGHLVLHSTNPTENMETEATAFAAEFLMPESEIRPELRR LDLGKLLELKREWGVSMQALLERAYRMGLVSAEARTKLYKAMNARGWKTKEPGIESIVREKPSLPAHIGMTLRSRGFTDQ QAAAIAGYANPADNPFRPEGGRLHAI
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38664; Mature: 38664
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGVTDD CCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH LLIHGNRFRGALAVDAHMRRHKTTKASAWRQLEARLNLLRVHASFLFEEVAINSEQHVPA HEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FDPEFTAAEDAARLVRAQWRMPMGPVVNLTRWMEAAGCLVFEEDFATQRIDGLSQWVDDY CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCC PVMLINANAAPDRKRLTLAHELGHLVLHSTNPTENMETEATAFAAEFLMPESEIRPELRR CEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCHHHHH LDLGKLLELKREWGVSMQALLERAYRMGLVSAEARTKLYKAMNARGWKTKEPGIESIVRE CCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC KPSLPAHIGMTLRSRGFTDQQAAAIAGYANPADNPFRPEGGRLHAI CCCCCHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGLGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGVTDD CCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH LLIHGNRFRGALAVDAHMRRHKTTKASAWRQLEARLNLLRVHASFLFEEVAINSEQHVPA HEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FDPEFTAAEDAARLVRAQWRMPMGPVVNLTRWMEAAGCLVFEEDFATQRIDGLSQWVDDY CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCC PVMLINANAAPDRKRLTLAHELGHLVLHSTNPTENMETEATAFAAEFLMPESEIRPELRR CEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCHHHHH LDLGKLLELKREWGVSMQALLERAYRMGLVSAEARTKLYKAMNARGWKTKEPGIESIVRE CCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC KPSLPAHIGMTLRSRGFTDQQAAAIAGYANPADNPFRPEGGRLHAI CCCCCHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA