Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637854
Identifier: 121637854
GI number: 121637854
Start: 2201235
End: 2202137
Strand: Reverse
Name: 121637854
Synonym: BCG_1988c
Alternate gene names: NA
Gene position: 2202137-2201235 (Counterclockwise)
Preceding gene: 121637855
Following gene: 121637853
Centisome position: 50.34
GC content: 63.12
Gene sequence:
>903_bases TTGCGCCAAGCGAGTGGGCTTGCCCGTGAAGGCGCCGGAACCATCGGCGCAGCCCAGCGCAGGGTCATCTATGCCGTTCA AGATGCCCACAACGCGGGCTTCAACGTCGAAGAGGACCTCTCGGTCACCGACACCCGAACCAGCCGCACCTTCGCCGAAC AAGCAGCTCGCCAGGCCCAAGCACAAGCATTGGCCGGGGATATCCGCCAACGCGCGACACAACTCATCGGAGTCGAACAC GAAGTGGCCGCCAAAATAGCCACCGCTACCGCACCCCTTAACACCGTCGGCTTCCACGAACCCCCAATCGCACCGTCGCT ACCGACACCGGTGCCCCACAACGAGAAACCGCAAATCCACGCGGTCGACCGCAGCTGGAAACAAGATCCACCCTCACCGA TGCCGGGCGACCCGAAAGACATGACAGCCGTACAGGCACGCGCAGCCTGGGACGCCGTCAACGCTGACATCGCTCGGTAC AACGCCCGATGCGGACGCACCTTCGTTCTGCCCAACGAGCAGGCAGCCTACGACGCGTGCATCGCGGACAAGGGTTCTCT CCTTGAAAGACAAGCCGCAATCAGAGCCCGGTTAGGCGAATTGGGCGTGCCGGTCGAAGGCGAACCCCCTCCTGCTCCCG ACCCCGCTGGACCACAACCGAACGAAGGCTTACCTCCGCCCGGTGTCAGCCCGCCCGCCGAGAGCAACCTAACGGTTGGA CCGCCCAGTCGTCCTATCCAACAGGCTCGCGGCGGCGAAAGCCTCTGGGACGAGAACGGCGGCGAGTGGCGATATTTTCC GGGAGACAATTACCGCTATCCGCATTGGGATTACAACCCCCACGATTCGCCGACCGCCAGGTGGCAGAATATTCCCATCG GGGACCTTCCGACTCACAAGTGA
Upstream 100 bases:
>100_bases GTAACCGATCCCACTTCATCGCGTGGGAAGGCGCAGGCGGTGATGGCTGCGACAGCGAACCGGCGCTGACCTACAGATAG TCAGTGGCATAGCCGAGCAT
Downstream 100 bases:
>100_bases TTGGACCAGAATGACCGTTTTCCGTATCAAGCCGGATAACTACTTCGGTGACGTGGTTCTGGCGGCCGCAGACCGGGATG GGCTTCGCATTTTCCAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEH EVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARY NARCGRTFVLPNEQAAYDACIADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK
Sequences:
>Translated_300_residues MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEH EVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARY NARCGRTFVLPNEQAAYDACIADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK >Mature_300_residues MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQAQALAGDIRQRATQLIGVEH EVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIHAVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARY NARCGRTFVLPNEQAAYDACIADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32339; Mature: 32339
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ CCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH IADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK CCCCHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQASGLAREGAGTIGAAQRRVIYAVQDAHNAGFNVEEDLSVTDTRTSRTFAEQAARQAQ CCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AQALAGDIRQRATQLIGVEHEVAAKIATATAPLNTVGFHEPPIAPSLPTPVPHNEKPQIH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AVDRSWKQDPPSPMPGDPKDMTAVQARAAWDAVNADIARYNARCGRTFVLPNEQAAYDAC ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH IADKGSLLERQAAIRARLGELGVPVEGEPPPAPDPAGPQPNEGLPPPGVSPPAESNLTVG HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PPSRPIQQARGGESLWDENGGEWRYFPGDNYRYPHWDYNPHDSPTARWQNIPIGDLPTHK CCCCHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]