Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637771
Identifier: 121637771
GI number: 121637771
Start: 2118306
End: 2120405
Strand: Direct
Name: 121637771
Synonym: BCG_1904
Alternate gene names: NA
Gene position: 2118306-2120405 (Clockwise)
Preceding gene: 121637770
Following gene: 121637776
Centisome position: 48.42
GC content: 66.9
Gene sequence:
>2100_bases GTGCAGATCCTGGTTACCGACGCCACGGGTGCCGTCGGGCGGTCGGTCACTCGGCAGTTGATCGCTGCCGGACACACGGT GAGCGGTATAGCCCAGCACCCGCACGATGCTCTGGACCCCCGCGTCGACTATGTTTGCGCGTCGTTGCGCAACCCAGTGC TGCAAGAGTTAGCCGGCGAAGCCGACGCGGTGATCCATCTCGCCCCGGTCGACACCAGCGCCCCGGGCGGTGTTGGCATC ACCGGACTGGCACATGTGGCCAACGCGGCCGCCCGCGCCGGTGCCCGGCTGCTGTTCGTTTCTCAGGCCGCTGGGCGACC CGAACTATATCGGCAGGCTGAGACGCTGGTGTCCACCGGTTGGGCACCCAGCTTGGTCATCCGTATTGCGCCACCGGTCG GCCGCCAACTCGATTGGATGGTGTGCCGGACAGTGGCCACGCTGCTGCGGAGCAAAGTCTCGGCACGGCCGATACGAGTG CTACATCTCGACGACTTGGTCCGCTTCCTGGTTTTGGCGCTGAATACCGACCGCAACGGTGTCGTTGACCTGGCCACCCC TGACACCACCAATGTGGTCACCGCGTGGCGGCTGCTCCGATCCGTGGACCCGCACTTGCGAACACGTCGGGTCCGCAGCT GGGAGCAATTGATTCCCGAGGTGGATATCGCTGCCGTGCAGGAGGATTGGAACTTCGAGTTCGGCTGGCAAGCGACCGAA GCAATTGTCGACACCGGGCGGGGCCTCGTCGGCCGCAGACTGCACCCGGCAGGCGCGACCAACGGATCGGGTCAACTAGC ACTGCCGGTGGAGGCGCCCCCGCGGTCTGTGCCTTCCCACGGGGAACCCTTGGGCAGCGCGGCTCCAGAAGGGTTGGAGG GAGAGTTCGACGACCGTATCGACGAGCGGTTCCCGGTCTTCAGCTCGGCCAGTCTCGCCGAAGCGCTGCCGGGTCCGCTG ACCCCGATGACGCTGGATGTCCAGTTGAGTGGACTGCGCGCGGCCGGTCGGGCGATGGGTCGGGTACTGGCGCTTGGCGG TGTCGTTGCCGATGAGTGGGAGAGAAGAGCCATCGCGGTGTTCGGTCACCGCCCGTATATCGGAGTGTCGGCCAATATTG TGGCCGCCGCCCAACTGCCGGGGTGGGACGCGCAGGCCGTAGCCCGGCGGGCACTGGGCGAGCAACCGCAGGTCACTGAG CTGCTTCCGTTTGGTCGACCGCAACTTGCGGGCGGACCGCTCGGCTCGGTCGCGAAGGTGGTCGTGACGGCGCGGTCGCT GGCCCTGCTGCGCCATCTCCGGAGCGACACACACCACTATGTTGCCGCCGCAGATGCCGAGCACCTCGCTGCCGGGCAGC TTGCCTCGCTACCGGACGCCGGCTTGGAGGTCCGGATTCGGCTGTTGCGTGATCGCATCCACCAAGGCTGGATTCTTACG GTGCTGTGGGTGATCGACACGGGCGTCACAGCGGCGACGTTAGAGCACACCCGCGCAGGCTCCGCGGTGTCCGGAGGGGG CATGATCATGGAAAGTGGCAGAATCGGCGCCGAGATTGCTCCGCTGGCTGCGGTGCTGCGCGCCGACCCGCCGCTGTGCG CGCTGGCCAACGACGGCAACCTCGCCAGCATCCGCGCGCTGTCTGCTCCCGCCGCCGCCGCAGTTGACGCGGTCATTGCC CGGATAGGGCACCGCGGGTTAGGCGAAGCCGAGCTGGCTAACCTGACGTTTGCCGACGATCCGGCGCTACTGCTGAAGAC AGCCGCCGAAATCGCCGCGCGGCCCGCCGGGCCAGCTCACCCAGCGACGTTGATCCAGCGACTGGCTGCCGGCACGCGCA GTGCCCGGGAGCTGGCGCACGGCACCACCATCCGATTCACCCATGAGCTCCGGATGACATTGCGGGAGTTGGGATCTCGA CGAGTCGCGGCGGATGTGATAGACGTCGTTGACGACGTGTTCTACCTGACCTGCGACGAACTGATTACCACGCCGGCCGA CGCTCGGCTGCGAATCAAACGTCGGCGCGCCGAACGAGAACGCCTGCAGGCACAGCGCCCGCCAGACGTTATCGATCATG CCTGGGTACCCGTGGAGTAG
Upstream 100 bases:
>100_bases AGCCGGCGGGCAGCACGAGTCACGTTCCAGAAGCAATGGTCGCGCAAGCGACACTGACGTGCCTATTGTCATGAGGAGAC GTTGGGGGAGGTGAGGCCGG
Downstream 100 bases:
>100_bases CGGTCAACACACGTCAATTCGTCGTCAGGTCCGCCAACGGCCACTGCGGATCAACCAGCCTGTCAACGTCGACCGGGTTC CCGGACCGGATCAGGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAPGGVGI TGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRV LHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLRSVDPHLRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATE AIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEGLEGEFDDRIDERFPVFSSASLAEALPGPL TPMTLDVQLSGLRAAGRAMGRVLALGGVVADEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTE LLPFGRPQLAGGPLGSVAKVVVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILT VLWVIDTGVTAATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGNLASIRALSAPAAAAVDAVIA RIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAGTRSARELAHGTTIRFTHELRMTLRELGSR RVAADVIDVVDDVFYLTCDELITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE
Sequences:
>Translated_699_residues MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAPGGVGI TGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRV LHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLRSVDPHLRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATE AIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEGLEGEFDDRIDERFPVFSSASLAEALPGPL TPMTLDVQLSGLRAAGRAMGRVLALGGVVADEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTE LLPFGRPQLAGGPLGSVAKVVVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILT VLWVIDTGVTAATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGNLASIRALSAPAAAAVDAVIA RIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAGTRSARELAHGTTIRFTHELRMTLRELGSR RVAADVIDVVDDVFYLTCDELITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE >Mature_699_residues MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAPGGVGI TGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRV LHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLRSVDPHLRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATE AIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEGLEGEFDDRIDERFPVFSSASLAEALPGPL TPMTLDVQLSGLRAAGRAMGRVLALGGVVADEWERRAIAVFGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTE LLPFGRPQLAGGPLGSVAKVVVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILT VLWVIDTGVTAATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGNLASIRALSAPAAAAVDAVIA RIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAHPATLIQRLAAGTRSARELAHGTTIRFTHELRMTLRELGSR RVAADVIDVVDDVFYLTCDELITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 - InterPro: IPR008279 [H]
Pfam domain/function: PF01370 Epimerase; PF00391 PEP-utilizers [H]
EC number: NA
Molecular weight: Translated: 74340; Mature: 74340
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGE CEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHCCC ADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTG CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCC WAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDRNG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC VVDLATPDTTNVVTAWRLLRSVDPHLRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATE EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHH AIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEGLEGEFDDRI HHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DERFPVFSSASLAEALPGPLTPMTLDVQLSGLRAAGRAMGRVLALGGVVADEWERRAIAV HHCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCEEEE FGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTELLPFGRPQLAGGPLGSVAKV ECCCCEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHH VVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILT HHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCHHHH VLWVIDTGVTAATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGN HHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC LASIRALSAPAAAAVDAVIARIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAH EEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEECCCCHHHHHHHHHHHCCCCCCCC PATLIQRLAAGTRSARELAHGTTIRFTHELRMTLRELGSRRVAADVIDVVDDVFYLTCDE HHHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE HHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC >Mature Secondary Structure MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGE CEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHCCC ADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTG CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCC WAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDRNG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC VVDLATPDTTNVVTAWRLLRSVDPHLRTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQATE EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHH AIVDTGRGLVGRRLHPAGATNGSGQLALPVEAPPRSVPSHGEPLGSAAPEGLEGEFDDRI HHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DERFPVFSSASLAEALPGPLTPMTLDVQLSGLRAAGRAMGRVLALGGVVADEWERRAIAV HHCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCEEEE FGHRPYIGVSANIVAAAQLPGWDAQAVARRALGEQPQVTELLPFGRPQLAGGPLGSVAKV ECCCCEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHH VVTARSLALLRHLRSDTHHYVAAADAEHLAAGQLASLPDAGLEVRIRLLRDRIHQGWILT HHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCHHHH VLWVIDTGVTAATLEHTRAGSAVSGGGMIMESGRIGAEIAPLAAVLRADPPLCALANDGN HHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC LASIRALSAPAAAAVDAVIARIGHRGLGEAELANLTFADDPALLLKTAAEIAARPAGPAH EEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEECCCCHHHHHHHHHHHCCCCCCCC PATLIQRLAAGTRSARELAHGTTIRFTHELRMTLRELGSRRVAADVIDVVDDVFYLTCDE HHHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LITTPADARLRIKRRRAERERLQAQRPPDVIDHAWVPVE HHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]