Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637737
Identifier: 121637737
GI number: 121637737
Start: 2080785
End: 2081651
Strand: Direct
Name: 121637737
Synonym: BCG_1869
Alternate gene names: NA
Gene position: 2080785-2081651 (Clockwise)
Preceding gene: 121637735
Following gene: 121637750
Centisome position: 47.57
GC content: 66.09
Gene sequence:
>867_bases GTGACATCACCGAGTGTCCGGGAGTGGCGTGACGGTGGCCGCTGGCTGCCGACGGCTGTCGGAAAGGTGTTCGTCCGGTC GGGGCCGGGCGACACGCCAACAATGCTCCTGCTGCATGGCTATCCGTCCAGTTCGTTCGACTTCCGGGCGGTGATTCCAC ACCTGACCGGCCAGGCTTGGGTAACGATGGATTTTCTGGGCTTTGGCTTGTCCGACAAGCCGCGCCCGCACCGGTACAGC CTGCTGGAGCAGGCCCACCTGGTGGAAACGGTGGTCGCCCACACCGTGACCGGCGCGGTCGTCGTGCTGGCCCACGACAT GGGCACGTCGGTGACCACCGAGCTGCTAGCCCGTGATTTGGACGGCCGGTTGCCGTTCGATCTCCGACGTGCGGTGCTGA GCAACGGCAGTGTGATCTTGGAGCGGGCCAGCCTGCGTCCGATCCAGAAAGTACTGCGCAGCCCGCTTGGTCCGGTCGCT GCCCGGCTGGTCAGCCGCGGTGGCTTCACACGAGGGTTTGGCCGGATCTTCTCCCCAGCGCACCCGCTGTCGGCGCAGGA GGCCCAAGCCCAGTGGGAGTTGCTGTGCTACAACGACGGCAACCGGATCCCGCACCTGCTGATCAGCTACCTCGACGAGC GGATACGGCACGCGCAGCGCTGGCATGGCGCGGTCCGCGATTGGCCCAAACCGCTTGGGTTCGTGTGGGGACTCGACGAT CCGGTGGCAACAACCAACGTGCTCAATGGACTACGGGAATTGCGCCCCAGCGCCGCCGTCGTGGAACTGCCAGGGTTGGG CCACTACCCGCAGGTCGAGGCTCCCAAAGCATATGCCGAGGCCGCGCTATCGCTGCTCGTCGACTAG
Upstream 100 bases:
>100_bases GTCGAACCAGCGCGACTCGAACGGGTACAGCTGCGGATCCGGCGTGAAATCGATGCTCATTACCCTCCTCCGATCGCGCT CATGATGGTATGCCCGAAGG
Downstream 100 bases:
>100_bases CCGGCTACGGCTGTATCACGGGCAGATCGATGCGAGAGGCATGCATCCGGCTACGGTAGACGCGCACGGTCGGTGCGCAA CCGGGAAGGATGGCGAAGTG
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAWVTMDFLGFGLSDKPRPHRYS LLEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVA ARLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDD PVATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD
Sequences:
>Translated_288_residues MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAWVTMDFLGFGLSDKPRPHRYS LLEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVA ARLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDD PVATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD >Mature_287_residues TSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAWVTMDFLGFGLSDKPRPHRYSL LEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDLDGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVAA RLVSRGGFTRGFGRIFSPAHPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDDP VATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily
Homologues:
Organism=Homo sapiens, GI29294637, Length=298, Percent_Identity=32.8859060402685, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI29294635, Length=298, Percent_Identity=32.8859060402685, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI29294639, Length=298, Percent_Identity=32.8859060402685, Blast_Score=148, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1834_MYCTU (Q50599)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: C70722 - RefSeq: NP_216350.1 - RefSeq: NP_336340.1 - ProteinModelPortal: Q50599 - EnsemblBacteria: EBMYCT00000001818 - EnsemblBacteria: EBMYCT00000070582 - GeneID: 888761 - GeneID: 923740 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1882 - KEGG: mtu:Rv1834 - TIGR: MT1882 - TubercuList: Rv1834 - GeneTree: EBGT00050000015244 - HOGENOM: HBG748003 - OMA: YRFKQNR - ProtClustDB: CLSK867982 - InterPro: IPR000073 - InterPro: IPR000639 - PRINTS: PR00412
Pfam domain/function: PF00561 Abhydrolase_1
EC number: NA
Molecular weight: Translated: 31677; Mature: 31546
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAW CCCCCCHHHHCCCCCCHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCE VTMDFLGFGLSDKPRPHRYSLLEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDL EEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHC DGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVAARLVSRGGFTRGFGRIFSPA CCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCC HPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDD CCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC PVATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TSPSVREWRDGGRWLPTAVGKVFVRSGPGDTPTMLLLHGYPSSSFDFRAVIPHLTGQAW CCCCCHHHHCCCCCCHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCE VTMDFLGFGLSDKPRPHRYSLLEQAHLVETVVAHTVTGAVVVLAHDMGTSVTTELLARDL EEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHC DGRLPFDLRRAVLSNGSVILERASLRPIQKVLRSPLGPVAARLVSRGGFTRGFGRIFSPA CCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCC HPLSAQEAQAQWELLCYNDGNRIPHLLISYLDERIRHAQRWHGAVRDWPKPLGFVWGLDD CCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC PVATTNVLNGLRELRPSAAVVELPGLGHYPQVEAPKAYAEAALSLLVD CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036