Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is erg3
Identifier: 121637716
GI number: 121637716
Start: 2057523
End: 2058425
Strand: Direct
Name: erg3
Synonym: BCG_1848
Alternate gene names: 121637716
Gene position: 2057523-2058425 (Clockwise)
Preceding gene: 121637713
Following gene: 121637717
Centisome position: 47.03
GC content: 61.24
Gene sequence:
>903_bases ATGCGGGACCCGGTACTGTTCGCCATTCCATGTTTTCTATTGCTGCTGATTCTCGAATGGACGGCGGCCCGCAAGCTGGA AAGCATCGAGACCGCTGCTACCGGGCAGCCACGGCCCGCCTCGGGCGCTTACCTCACCCGCGACTCGGTGGCCAGCATCT CGATGGGGCTGGTTTCGATAGCCACCACCGCCGGCTGGAAGTCCCTTGCCCTGCTCGGTTATGCCGCAATCTATGCCTAC CTTGCCCCCTGGCAGCTGTCCGCCCACCGGTGGTACACCTGGGTAATCGCGATCGTTGGTGTCGATCTGCTGTACTACTC CTATCACCGCATCGCCCACCGAGTTCGGCTGATCTGGGCTACCCACCAGGCGCATCACTCCAGCGAATACTTCAACTTCG CCACCGCGCTGCGCCAGAAGTGGAACAACAGCGGCGAGATTCTCATGTGGGTTCCGCTGCCACTGATGGGGCTTCCCCCT TGGATGGTGTTCTGCAGTTGGTCGCTGAACTTGATCTACCAGTTCTGGGTGCACACCGAGCGGATCGACAGGCTGCCGCG GTGGTTCGAATTCGTCTTCAATACCCCGTCGCACCACCGGGTCCACCACGGAATGGACCCGGTGTATCTGGACAAGAACT ATGGCGGCATCCTCATCATCTGGGACCGCCTGTTCGGTAGCTTTCAGCCGGAGCTATTCCGACCGCATTATGGCCTGACC AAGCGGGTCGACACGTTCAACATCTGGAAGCTGCAGACCCGCGAGTACGTGGCGATCGTGCGTGACTGGCGGTCGGCAAC ACGTCTGCGGGATCGGCTGGGCTACGTCTTCGGACCGCCGGGCTGGGAACCGCGCACCATCGATAAATCCAATGCCGCCG CCTCCCTGGTCACGTCTCGGTAA
Upstream 100 bases:
>100_bases AAGCGGCTTCACTGTCAAGTCGTCACCTGTCACGCATGCGAGTCGTAGCCTGTCTGATGTGGATGCCGTCGCCGGATTCT TCTCAGCGCTGCCCGAGGAA
Downstream 100 bases:
>100_bases CGTCGCGACCCGACATTGCGAAAGTATTACCGTCGGGTTTTGGTACGCCTTAGCCGTAACCGGCGGCGGGCGATGCGCTT GGCCCCGACGGATGGGAGTT
Product: membrane-bound C-5 sterol desaturase erg3
Products: NA
Alternate protein names: Sterol-C5-desaturase
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRDPVLFAIPCFLLLLILEWTAARKLESIETAATGQPRPASGAYLTRDSVASISMGLVSIATTAGWKSLALLGYAAIYAY LAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSEYFNFATALRQKWNNSGEILMWVPLPLMGLPP WMVFCSWSLNLIYQFWVHTERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSFQPELFRPHYGLT KRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFGPPGWEPRTIDKSNAAASLVTSR
Sequences:
>Translated_300_residues MRDPVLFAIPCFLLLLILEWTAARKLESIETAATGQPRPASGAYLTRDSVASISMGLVSIATTAGWKSLALLGYAAIYAY LAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSEYFNFATALRQKWNNSGEILMWVPLPLMGLPP WMVFCSWSLNLIYQFWVHTERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSFQPELFRPHYGLT KRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFGPPGWEPRTIDKSNAAASLVTSR >Mature_300_residues MRDPVLFAIPCFLLLLILEWTAARKLESIETAATGQPRPASGAYLTRDSVASISMGLVSIATTAGWKSLALLGYAAIYAY LAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWATHQAHHSSEYFNFATALRQKWNNSGEILMWVPLPLMGLPP WMVFCSWSLNLIYQFWVHTERIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSFQPELFRPHYGLT KRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFGPPGWEPRTIDKSNAAASLVTSR
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sterol desaturase family
Homologues:
Organism=Homo sapiens, GI51972212, Length=283, Percent_Identity=37.8091872791519, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI25144659, Length=249, Percent_Identity=33.7349397590361, Blast_Score=148, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERG3_MYCBO (P68434)
Other databases:
- EMBL: AF283500 - EMBL: BX248340 - RefSeq: NP_855496.1 - EnsemblBacteria: EBMYCT00000017593 - GeneID: 1092941 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1844 - GeneTree: EBGT00050000017401 - HOGENOM: HBG742665 - OMA: WIHTERI - ProtClustDB: CLSK791408 - BioCyc: MBOV233413:MB1844-MONOMER - InterPro: IPR006694
Pfam domain/function: PF04116 FA_hydroxylase
EC number: NA
Molecular weight: Translated: 34883; Mature: 34883
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1634236c)-; HASH(0x165cd604)-; HASH(0x12765ea0)-; HASH(0x124304ec)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDPVLFAIPCFLLLLILEWTAARKLESIETAATGQPRPASGAYLTRDSVASISMGLVSI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHH ATTAGWKSLALLGYAAIYAYLAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWA HHHCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE THQAHHSSEYFNFATALRQKWNNSGEILMWVPLPLMGLPPWMVFCSWSLNLIYQFWVHTE HHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSFQPELFRPHYGLT HHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCC KRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFGPPGWEPRTIDKSNAAASLVTSR CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHCCH >Mature Secondary Structure MRDPVLFAIPCFLLLLILEWTAARKLESIETAATGQPRPASGAYLTRDSVASISMGLVSI CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHH ATTAGWKSLALLGYAAIYAYLAPWQLSAHRWYTWVIAIVGVDLLYYSYHRIAHRVRLIWA HHHCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE THQAHHSSEYFNFATALRQKWNNSGEILMWVPLPLMGLPPWMVFCSWSLNLIYQFWVHTE HHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RIDRLPRWFEFVFNTPSHHRVHHGMDPVYLDKNYGGILIIWDRLFGSFQPELFRPHYGLT HHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCC KRVDTFNIWKLQTREYVAIVRDWRSATRLRDRLGYVFGPPGWEPRTIDKSNAAASLVTSR CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972