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The map label for this gene is PPE33a

Identifier: 121637711

GI number: 121637711

Start: 2052284

End: 2052847

Strand: Direct

Name: PPE33a

Synonym: BCG_1842

Alternate gene names: 121637711

Gene position: 2052284-2052847 (Clockwise)

Preceding gene: 121637710

Following gene: 121637712

Centisome position: 46.91

GC content: 66.67

Gene sequence:

>564_bases
ATGGATTTCGGATTGCAGCCACCGGAGATCACCTCCGGGGAGATGTACCTAGGTCCGGGCGCCGGTCCGATGTTGGCTGC
GGCAGTGGCCTGGGATGGGTTGGCGGCCGAATTGCAGTCCATGGCGGCCTCCTACGCCTCGATCGTCGAGGGCATGGCGA
GTGAGTCATGGTTGGGTCCGTCGTCGGCCGGTATGGCCGCTGCGGCCGCACCATATGTGACCTGGATGTCGGGTACCTCG
GCACAGGCCAAGGCGGCCGCTGACCAGGCCAGAGCCGCGGTGGTCGCCTACGAAACCGCGTTCGCGGCGGTGGTGCCACC
GCCGCAGATTGCGGCCAACCGCAGCCAGCTCATATCGCTGGTGGCGACCAACATTTTCGGACAAAACACCGCCGCGATCG
CAGCCACCGAAGCCGAATACGGCGAAATGTGGGCCCAGGACACCATGGCGATGTTCGGCTATGCCAGCTCCTCGGCGACC
GCCTCGCGGCTGACCCCGTTCACTGCACCGCCGCAGACCACCAACCCGTCCGGACTTGCCGGCCAGGCGGCCGCAACGGG
GTAA

Upstream 100 bases:

>100_bases
GTTAGCCCCCACCGGAGAGGAGAGAAGGACGGTGTCATCGCCACTGTGGCCGGTGGCTGGCGGCCAGCCAGTTAGCGGCC
GGTTGAGGAAAGGTGTGGCA

Downstream 100 bases:

>100_bases
GCGACCGCCCTAGCGAGCGGCACCAATGCGGTGACAACCGCGCTTTCGAGTGCAGCGGCGCAGTTTCCGTTCGACATCAT
CCCGACCCTGCTGCAGGGCC

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPSSAGMAAAAAPYVTWMSGTS
AQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT
ASRLTPFTAPPQTTNPSGLAGQAAATG

Sequences:

>Translated_187_residues
MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPSSAGMAAAAAPYVTWMSGTS
AQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT
ASRLTPFTAPPQTTNPSGLAGQAAATG
>Mature_187_residues
MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGPSSAGMAAAAAPYVTWMSGTS
AQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISLVATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSAT
ASRLTPFTAPPQTTNPSGLAGQAAATG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PPE33_MYCTU (Q79FJ5)

Other databases:

- EMBL:   BX842577
- EMBL:   AE000516
- PIR:   B70932
- RefSeq:   NP_336316.1
- RefSeq:   YP_177845.1
- HSSP:   Q79FE1
- ProteinModelPortal:   Q79FJ5
- SMR:   Q79FJ5
- EnsemblBacteria:   EBMYCT00000003845
- EnsemblBacteria:   EBMYCT00000070673
- GeneID:   885555
- GeneID:   923778
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1857
- KEGG:   mtu:Rv1809
- TIGR:   MT1857
- TubercuList:   Rv1809
- GeneTree:   EBGT00050000014887
- HOGENOM:   HBG572308
- OMA:   VANDSMS
- ProtClustDB:   CLSK799847
- InterPro:   IPR022171
- InterPro:   IPR000030

Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE

EC number: NA

Molecular weight: Translated: 18762; Mature: 18762

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL
CCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEHHHHHEEECCCCHHHCCHHHHHHH
VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
GQAAATG
CCCCCCC
>Mature Secondary Structure
MDFGLQPPEITSGEMYLGPGAGPMLAAAVAWDGLAAELQSMAASYASIVEGMASESWLGP
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSAGMAAAAAPYVTWMSGTSAQAKAAADQARAAVVAYETAFAAVVPPPQIAANRSQLISL
CCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEHHHHHEEECCCCHHHCCHHHHHHH
VATNIFGQNTAAIAATEAEYGEMWAQDTMAMFGYASSSATASRLTPFTAPPQTTNPSGLA
HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
GQAAATG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036