Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is PE19 [H]
Identifier: 121637692
GI number: 121637692
Start: 2030906
End: 2031205
Strand: Direct
Name: PE19 [H]
Synonym: BCG_1823
Alternate gene names: 121637692
Gene position: 2030906-2031205 (Clockwise)
Preceding gene: 121637691
Following gene: 121637693
Centisome position: 46.43
GC content: 65.33
Gene sequence:
>300_bases ATGTCGTTCGTGACCACACAGCCGGAAGCCCTGGCAGCTGCGGCGGCGAACCTACAGGGTATTGGCACGACAATGAACGC CCAGAACGCGGCCGCGGCTGCTCCAACCACCGGAGTAGTGCCCGCAGCCGCCGATGAAGTATCAGCGCTGACCGCGGCTC AGTTTGCTGCGCACGCGCAGATGTACCAAACGGTCAGCGCCCAGGCCGCGGCCATTCACGAAATGTTCGTGAACACGCTG GTGGCCAGTTCTGGCTCATACGCGGCCACCGAGGCGGCCAACGCAGCCGCTGCCGGCTGA
Upstream 100 bases:
>100_bases CACTTGCGAACGGGTGGCATCGAAATCAACTTGTTGCGTTGCAGTGATCTACTCTCTTGCAGAGAGCCGTTGCTGGGATT AATTGGGAGAGGAAGACAGC
Downstream 100 bases:
>100_bases ACGGGCTCGCACGAACCTGCTGAAGGAGAGGGGGAACATCCGGAGTTCTCGGGTCAGGGGTTGCGCCAGCGCCCAGCCGA TTCAGCTATCGGCGTCCATA
Product: PE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQMYQTVSAQAAAIHEMFVNTL VASSGSYAATEAANAAAAG
Sequences:
>Translated_99_residues MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQMYQTVSAQAAAIHEMFVNTL VASSGSYAATEAANAAAAG >Mature_98_residues SFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQMYQTVSAQAAAIHEMFVNTLV ASSGSYAATEAANAAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 9584; Mature: 9452
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MYQTVSAQAAAIHEMFVNTLVASSGSYAATEAANAAAAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC >Mature Secondary Structure SFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MYQTVSAQAAAIHEMFVNTLVASSGSYAATEAANAAAAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]