Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637677
Identifier: 121637677
GI number: 121637677
Start: 2010177
End: 2010995
Strand: Direct
Name: 121637677
Synonym: BCG_1808
Alternate gene names: NA
Gene position: 2010177-2010995 (Clockwise)
Preceding gene: 121637676
Following gene: 121637679
Centisome position: 45.95
GC content: 66.42
Gene sequence:
>819_bases ATGGCCAGCGATCTGTACCTGGGCTACCGCAACGACGACGCGGACACGCCGTTCGGCAAGTTCTTCAAACCCGAGATGGC CCCGCTGCCACAGCATGTCGTGGTGGCGTTGCAGCATGGCCCCCAGGCCGGGATGGCGTTGCTCGCCTTCGACGACGCCG CGAGCATCGTTGATGAGGGCTATCAGCAGACCGAGAACGGCTACGGGATTCTCGGCGACGGCAGCATGCAGGTATCCGTG CGCACCGACATGCCCGGGGTCACTCCCGCGATGTGGGCATGGTGGTTCGGCTGGCACGGCAGCGACACCCGCCGCTACAA GCTGTGGCACCCGCGGGCCCATCTATCGGCGCGGTGGAAGGACGGCGACCAGGACAGCGGGGCCGGCCGTCGGGGCGCGC AGCGTTACGTCGGCCGCTGGTCGATGATCAGCGAGTACATCGGCTCGACGAAACTGGGTGCCGCAATACAATTCGTCGAG CCGGCGGCCATGGGTCTGCCCGACGACAGCGACGATACGGTGTCGATCTGTGCGCGGTTGGGCTCTGCTGACGCCCCGGT GGATGCGGGCTGGTTCGTCCATCAGGTCCGATCGACGCCGGGCGGGTCCGAGATGCGGTCACGGTTTTGGATGGGCGGAC CGCACATCGCGGTGCGCAAGGCACCCGAGGTCGCGTCCAAGGCGGTGCGTCCCATCGCGTCGAAGCTAATCGGCGTCTCG GAATCGACCGCGCGTAATCTGCTGGTGTACTGCGCGCAGGAGATGAACCACCTGGCGGGGTTCTTGGCGGACCTGTGGGA AAGCTTCGGTGACGAGTGA
Upstream 100 bases:
>100_bases CGGCGCGCTTCGCCAGCGACGCGGCCATGGCCAAGCTCGACCGGGTGCGCGCCGAATACGACCCCGACGGTTTGTTCAAC AGTTGGATGGGAAGAATCTG
Downstream 100 bases:
>100_bases GGTTTCAGCTTTGCTCGGCAAACGCTGGCGCCACGTATTTTTCGACCAGCCGGCGTTCGGCTTCGTCGTTCTCAGCTGGC CAATACATCAGTGAGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSV RTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVE PAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVS ESTARNLLVYCAQEMNHLAGFLADLWESFGDE
Sequences:
>Translated_272_residues MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSV RTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVE PAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVS ESTARNLLVYCAQEMNHLAGFLADLWESFGDE >Mature_271_residues ASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSVR TDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEP AAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVSE STARNLLVYCAQEMNHLAGFLADLWESFGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29752; Mature: 29620
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEG CCCCEEEEECCCCCCCCCHHCCCCCCCCCCHHEEEEECCCCCCCEEEEEECHHHHHHHHH YQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWK HHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEECCC DGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECHHHCCCCCCCCHHHHHHHHH GSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVS CCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC ESTARNLLVYCAQEMNHLAGFLADLWESFGDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEG CCCEEEEECCCCCCCCCHHCCCCCCCCCCHHEEEEECCCCCCCEEEEEECHHHHHHHHH YQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWK HHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEECCC DGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECHHHCCCCCCCCHHHHHHHHH GSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVS CCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC ESTARNLLVYCAQEMNHLAGFLADLWESFGDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA