Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is cmk
Identifier: 121637620
GI number: 121637620
Start: 1944816
End: 1945508
Strand: Direct
Name: cmk
Synonym: BCG_1751
Alternate gene names: 121637620
Gene position: 1944816-1945508 (Clockwise)
Preceding gene: 121637619
Following gene: 121637621
Centisome position: 44.46
GC content: 65.95
Gene sequence:
>693_bases GTGAGTCGCCTAAGCGCAGCGGTAGTCGCGATCGACGGGCCGGCCGGCACCGGAAAATCCTCGGTGTCAAGGCGATTAGC GCGCGAGCTGGGCGCACGCTTTCTGGACACCGGGGCAATGTATCGGATCGTGACGTTGGCGGTGCTGCGTGCCGGTGCTG ATCCGTCCGATATCGCTGCCGTCGAGACGATTGCGTCGACGGTGCAGATGTCGTTAGGCTACGATCCCGACGGAGACAGC TGTTACCTTGCCGGAGAAGACGTTTCGGTTGAGATACGCGGTGACGCGGTCACCCGTGCGGTCTCCGCGGTGTCGTCGGT GCCGGCCGTACGCACCCGGCTGGTCGAGCTGCAGCGAACAATGGCTGAGGGCCCGGGCAGCATCGTCGTGGAGGGCCGCG ACATCGGAACCGTGGTGTTTCCGGATGCGCCGGTGAAAATCTTCTTGACCGCCTCGGCCGAAACGCGGGCCCGGCGGCGC AACGCCCAAAACGTCGCGGCGGGTTTGGCCGACGACTATGACGGGGTATTGGCCGATGTGCGCCGGCGCGACCACCTCGA TTCCACCCGGGCGGTGTCACCGCTGCAAGCCGCCGGTGATGCCGTCATCGTGGACACCAGCGATATGACCGAGGCCGAGG TGGTCGCCCATCTGTTGGAGCTGGTCACGCGGCGAAGTGAGGCAGTGCGGTGA
Upstream 100 bases:
>100_bases GTACCGATATCGGCGCGGTGTCACTGGGAAAGCAACGCCCGGGCAGCGTTCGGGCCTTGCGGTCGAACGAGATCGGGCAA CTGTACCAAGCGGTGGGCCT
Downstream 100 bases:
>100_bases CCCAGGACGGCACGTGGGTGGACGAAAGCGATTGGCAACTAGACGATTCGGAGATCGCGGAGTCCGGAGCGGCGCCTGTG GTGGCGGTAGTCGGCCGGCC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDS CYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRR NAQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR
Sequences:
>Translated_230_residues MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDS CYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRR NAQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR >Mature_229_residues SRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDSC YLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRN AQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=220, Percent_Identity=40, Blast_Score=157, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_MYCBO (P63804)
Other databases:
- EMBL: BX248340 - RefSeq: NP_855392.1 - ProteinModelPortal: P63804 - SMR: P63804 - EnsemblBacteria: EBMYCT00000015513 - GeneID: 1092704 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1739 - GeneTree: EBGT00050000015811 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - BioCyc: MBOV233413:MB1739-MONOMER - BRENDA: 2.7.4.14 - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 24178; Mature: 24046
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAA CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH VETIASTVQMSLGYDPDGDSCYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRT HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH MAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRNAQNVAAGLADDYDGVLADV HHCCCCEEEEECCCCCEEEECCCCEEEEEECCHHHHHHHHCHHHHHHCCCCCHHHHHHHH RRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR HHHHCCCHHHCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH VETIASTVQMSLGYDPDGDSCYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRT HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH MAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRNAQNVAAGLADDYDGVLADV HHCCCCEEEEECCCCCEEEECCCCEEEEEECCHHHHHHHHCHHHHHHCCCCCHHHHHHHH RRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR HHHHCCCHHHCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972