Click here to switch to the map view.

The map label for this gene is scpB [H]

Identifier: 121637618

GI number: 121637618

Start: 1943363

End: 1944058

Strand: Direct

Name: scpB [H]

Synonym: BCG_1749

Alternate gene names: 121637618

Gene position: 1943363-1944058 (Clockwise)

Preceding gene: 121637617

Following gene: 121637619

Centisome position: 44.42

GC content: 65.09

Gene sequence:

>696_bases
GTGACCGAACATATGCCCGAACACGATCCGAGCTATGGCATCCCGGATATCGCTGAGCCCGCGGAGCTGGATGCCGACGA
GCTTAAGCGTGTGCTAGAGGCGCTGCTGTTGGTGATCGACACCCCAGTGACAGCCGACGCGTTGGCCGCGGCCACCGAAC
AGCCGGTCTACCGGGTTGCGGCAAAGCTACAGTTGATGGCCGACGAGCTCACCGGGCGTGACAGCGGCATCGACCTGCGC
CACACGAGCGAGGGTTGGCGGATGTACACCCGCGCCCGATTCGCGCCCTATGTCGAGAAGCTGTTGCTGGACGGCGCGCG
AACCAAGCTCACCCGGGCCGCGCTGGAGACCCTGGCCGTGGTGGCCTACCGCCAGCCGGTCACACGAGCGCGGGTTAGTG
CGGTGCGCGGGGTCAACGTGGACGCCGTGATGCGTACGCTGTTGGCCCGCGGCCTGATCACCGAGGTTGGTACCGACGCC
GATACCGGCGCGGTGACGTTCGCCACCACCGAGCTCTTCCTGGAGCGCTTGGGATTGACGTCGCTGTCGGAGCTGCCCGA
TATCGCACCGCTGCTTCCCGACGTCGACACAATTGACGACCTGAGCGAATCCCTGGACAGTGAGCCACGTTTCATCAAAC
TCACCGGTGAGCTGGCGTCCGAGCAGACGCTGTCGTTCGACGTGGACCGTGATTGA

Upstream 100 bases:

>100_bases
CCCGGGCGGTAGCATTCGAGCAGTCAGAGCCGCTTGGCGCGCTCCAGGTTTCGTGGACCGGTGACGATGCAGAGCGCAGC
GATGAGAAGGAGCGGCGCTT

Downstream 100 bases:

>100_bases
TGGCCGAGCCGGAAGAGTCCCGGGAGCCCCGGGGCATCCGCCTGCAGAAAGTGTTGTCTCAGGCTGGAATCGCGTCGAGG
CGAGCCGCCGAGAAGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLR
HTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDA
DTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD

Sequences:

>Translated_231_residues
MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLR
HTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDA
DTGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
>Mature_230_residues
TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVAAKLQLMADELTGRDSGIDLRH
TSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAVVAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDAD
TGAVTFATTELFLERLGLTSLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 25277; Mature: 25146

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
HHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCH
SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
HHHHCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCC
>Mature Secondary Structure 
TEHMPEHDPSYGIPDIAEPAELDADELKRVLEALLLVIDTPVTADALAAATEQPVYRVA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKLQLMADELTGRDSGIDLRHTSEGWRMYTRARFAPYVEKLLLDGARTKLTRAALETLAV
HHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VAYRQPVTRARVSAVRGVNVDAVMRTLLARGLITEVGTDADTGAVTFATTELFLERLGLT
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCH
SLSELPDIAPLLPDVDTIDDLSESLDSEPRFIKLTGELASEQTLSFDVDRD
HHHHCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA