Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637587
Identifier: 121637587
GI number: 121637587
Start: 1909703
End: 1910527
Strand: Direct
Name: 121637587
Synonym: BCG_1718
Alternate gene names: NA
Gene position: 1909703-1910527 (Clockwise)
Preceding gene: 121637586
Following gene: 121637588
Centisome position: 43.66
GC content: 64.85
Gene sequence:
>825_bases ATGTCAACCGAACCGCTCGTCGTGGGAGCAGTCGCATACACACCCAACGTGGTCCCGATTTGGGAAGGCATCCGCGGCTA CTTCCAAGACTCCGAAAGCCCGGACACCCAAATGGATTTCGTGCTCTACTCCAACTACGCGCGGCTGGTCGATTCGCTGA TCGCCGGCCACATCGACATCGCCTGGAACACCAACCTGGCCTACGTGCGGACCGTGCTGCAAACCGGCGGGCGGTGCACG CCATTGGCCCAGCGCGATACCGACGTCGACTACACCACCGTGTTCGTTGCACATGCCGGCAGCGATCTGCACGGCGCTAA AGACATTGCCGGAAAGCGCCTTGCGCTCGGGTCCGCCGACTCTGCGCACGCGGCCATCTTGCCGCTCTATTATCTGCGCC GGGCGGGCATCGCCGAGTCTGACCTGCAGGTGATCCGCTTCGACACCGACATCGGCAAGCACGGCGACACCGGTCGCAGC GAACTCGACGCGGTGGATGCGGTGCTCGCCGGTGAGGCCGACGTGGCGGCGATCGGCAGCTCCACGTGGGCCGCGATGGG CGCCGCGGAGCTGATGGGGGAGTCGTTGACCGAGGTGTGGCGCACCGACGGCTACTGCCACTGCATGTTCACCGCGCTGG ATACGCTGCCCGCCGAAAGATACCAGCCGTGGCTCGACCGGTTGCTGGCGATGAGCTGGGATGACTCCGAGCATCGAAAG ATCCTCGAACTCGAGGGTTTACGACGTTGGGTGCCTCCGCACCTGGACGGCTACAAGCCGCTGTTCGAGGCCGTGCAGGA GCAGGGCATCGACCCGCGATGGTGA
Upstream 100 bases:
>100_bases GCGACGCCCGGGCGGGGTCGGTGATGGCGCCAACCGCCGACGCGCTCTACGACTTCTACGGCAGGGCCGTCACCGGGCTG CCGCTGTTCTAGGAGGCGAT
Downstream 100 bases:
>100_bases TCATAGAGCTGATGCGCCGGGTGGTAGGTCTCGCACAGGGAGCTACCGCCGAGGTCGCCGTCTATGGCGACCGAGATCGT GATCTCGCGGAGCGATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCT PLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRS ELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Sequences:
>Translated_274_residues MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCT PLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRS ELDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW >Mature_273_residues STEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDIAWNTNLAYVRTVLQTGGRCTP LAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSADSAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSE LDAVDAVLAGEADVAAIGSSTWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRKI LELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30214; Mature: 30083
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI CCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEE AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD EECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCEEECCCCC SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCC STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK CHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure STEPLVVGAVAYTPNVVPIWEGIRGYFQDSESPDTQMDFVLYSNYARLVDSLIAGHIDI CCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEE AWNTNLAYVRTVLQTGGRCTPLAQRDTDVDYTTVFVAHAGSDLHGAKDIAGKRLALGSAD EECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCEEECCCCC SAHAAILPLYYLRRAGIAESDLQVIRFDTDIGKHGDTGRSELDAVDAVLAGEADVAAIGS CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCC STWAAMGAAELMGESLTEVWRTDGYCHCMFTALDTLPAERYQPWLDRLLAMSWDDSEHRK CHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH ILELEGLRRWVPPHLDGYKPLFEAVQEQGIDPRW HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA