Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is pks11 [H]
Identifier: 121637573
GI number: 121637573
Start: 1896490
End: 1897551
Strand: Direct
Name: pks11 [H]
Synonym: BCG_1704
Alternate gene names: 121637573
Gene position: 1896490-1897551 (Clockwise)
Preceding gene: 121637572
Following gene: 121637576
Centisome position: 43.35
GC content: 65.35
Gene sequence:
>1062_bases ATGAGCGTCATCGCGGGTGTGTTCGGTGCGTTGCCGCCGCATCGCTATAGCCAAAGTGAGATCACTGATTCGTTTGTCGA GTTTCCCGGCCTTAAGGAACACGAGGAGATCATTCGGCGTTTGCATGCCGCCGCCAAGGTCAACGGTCGACACCTGGTGC TGCCGCTGCAGCAATACCCGTCGCTGACCGACTTCGGCGACGCCAACGAGATCTTTATCGAGAAGGCTGTCGACCTTGGC GTCGAGGCCTTGCTGGGCGCGCTCGATGATGCCAACCTGCGCCCCAGCGACATCGACATGATCGCCACCGCAACCGTCAC CGGCGTCGCGGTGCCGTCTTTGGATGCCCGGATCGCCGGGCGGCTTGGTCTGCGCCCCGACGTGCGGCGGATGCCGTTGT TCGGTCTGGGCTGCGTGGCAGGGGCGGCGGGCGTGGCCCGCCTGCGCGACTACCTGCGTGGCGCGCCCGACGACGTCGCG GTTCTGGTCTCGGTTGAGCTTTGCTCGCTGACGTATCCCGCGGTCAAACCAACCGTGTCGAGTCTGGTCGGGACCGCACT GTTCGGCGACGGAGCAGCCGCGGTGGTCGCCGTCGGCGACCGGCGCGCCGAGCAGGTTCGCGCTGGCGGACCGGACATCT TGGACTCGCGCAGCAGCCTGTACCCCGACTCGCTGCACATCATGGGTTGGGATGTCGGTTCCCATGGCCTGCGGCTGCGG CTTTCCCCGGACCTGACGAACCTGATCGAACGGTACCTAGCCAATGACGTCACCACGTTTCTTGATGCCCATCGGCTGAC CAAAGACGACATCGGCGCCTGGGTGAGCCATCCCGGTGGTCCCAAGGTCATCGACGCCGTCGCCACGAGCCTCGCGCTGC CTCCCGAGGCGCTCGAGCTGACCTGGCGCTCGCTGGGCGAGATCGGCAACCTTTCGTCGGCCTCGATACTGCATATTTTG CGCGACACCATCGAAAAGCGGCCACCCAGCGGAAGCGCCGGGCTGATGCTGGCGATGGGTCCTGGTTTCTGCACGGAACT CGTCTTACTGCGCTGGCGCTGA
Upstream 100 bases:
>100_bases AAATACGACAGGCGTTGAATAGCGATGTTTTTGCGAGATCGCGTAATGTGGCTTAAACTTTGGGCTTCGAGGGTGGCAAG TAACTTAAGTGGGCAGGGGC
Downstream 100 bases:
>100_bases CTTCCTGATTTCAACGGTCAATCCCGGCCAGGGGCGCAGCGCGGCAAAGTTGGCCGCCCGAATGCGGTGAGTCCGCTGAG CGGGCAACTGCAGCATGGCC
Product: putative chalcone synthase pks11
Products: NA
Alternate protein names: Naringenin-chalcone synthase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSVIAGVFGALPPHRYSQSEITDSFVEFPGLKEHEEIIRRLHAAAKVNGRHLVLPLQQYPSLTDFGDANEIFIEKAVDLG VEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGAPDDVA VLVSVELCSLTYPAVKPTVSSLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLR LSPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALELTWRSLGEIGNLSSASILHIL RDTIEKRPPSGSAGLMLAMGPGFCTELVLLRWR
Sequences:
>Translated_353_residues MSVIAGVFGALPPHRYSQSEITDSFVEFPGLKEHEEIIRRLHAAAKVNGRHLVLPLQQYPSLTDFGDANEIFIEKAVDLG VEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGAPDDVA VLVSVELCSLTYPAVKPTVSSLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLR LSPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALELTWRSLGEIGNLSSASILHIL RDTIEKRPPSGSAGLMLAMGPGFCTELVLLRWR >Mature_352_residues SVIAGVFGALPPHRYSQSEITDSFVEFPGLKEHEEIIRRLHAAAKVNGRHLVLPLQQYPSLTDFGDANEIFIEKAVDLGV EALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGAPDDVAV LVSVELCSLTYPAVKPTVSSLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLRL SPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALELTWRSLGEIGNLSSASILHILR DTIEKRPPSGSAGLMLAMGPGFCTELVLLRWR
Specific function: Unknown
COG id: COG3424
COG function: function code Q; Predicted naringenin-chalcone synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chalcone/stilbene synthases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012328 - InterPro: IPR018088 - InterPro: IPR001099 - InterPro: IPR011141 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF02797 Chal_sti_synt_C; PF00195 Chal_sti_synt_N [H]
EC number: =2.3.1.74 [H]
Molecular weight: Translated: 37640; Mature: 37508
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIAGVFGALPPHRYSQSEITDSFVEFPGLKEHEEIIRRLHAAAKVNGRHLVLPLQQYP CCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCC SLTDFGDANEIFIEKAVDLGVEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHEECCCCCHHHHH RLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGAPDDVAVLVSVELCSLTYPAVKPTVS CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCHHHHH SLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLR HHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEEECCCCEEEE LSPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALEL ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH TWRSLGEIGNLSSASILHILRDTIEKRPPSGSAGLMLAMGPGFCTELVLLRWR HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCC >Mature Secondary Structure SVIAGVFGALPPHRYSQSEITDSFVEFPGLKEHEEIIRRLHAAAKVNGRHLVLPLQQYP CHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCC SLTDFGDANEIFIEKAVDLGVEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHEECCCCCHHHHH RLGLRPDVRRMPLFGLGCVAGAAGVARLRDYLRGAPDDVAVLVSVELCSLTYPAVKPTVS CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCHHHHH SLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLR HHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEEECCCCEEEE LSPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALEL ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH TWRSLGEIGNLSSASILHILRDTIEKRPPSGSAGLMLAMGPGFCTELVLLRWR HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]