Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is pheT
Identifier: 121637558
GI number: 121637558
Start: 1865004
End: 1867499
Strand: Direct
Name: pheT
Synonym: BCG_1689
Alternate gene names: 121637558
Gene position: 1865004-1867499 (Clockwise)
Preceding gene: 121637557
Following gene: 121637560
Centisome position: 42.63
GC content: 68.91
Gene sequence:
>2496_bases ATGCGGCTACCCTACAGCTGGCTGCGCGAGGTGGTTGCGGTCGGCGCTTCGGGCTGGGACGTTACCCCAGGCGAACTCGA GCAGACGCTGTTGCGCATCGGCCACGAGGTCGAAGAGGTCATCCCCCTTGGTCCGGTGGACGGCCCGGTGACCGTGGGGC GGGTGGCCGATATCGAGGAGCTCACCGGCTACAAGAAGCCGATCCGGGCCTGCGCGGTAGATATCGGCGATCGGCAGTAT CGCGAGATTATTTGTGGTGCAACCAATTTCGCGGTTGGTGATCTGGTGGTGGTAGCGCTGCCCGGTGCCACGCTGCCCGG TGGATTCACCATTAGCGCCCGCAAGGCCTACGGTCGCAACTCCGACGGAATGATCTGCTCGGCAGCCGAACTCAATTTGG GCGCAGACCATTCCGGGATCCTGGTGTTGCCCCCCGGAGCCGCCGAGCCCGGAGCTGACGGCGCGGGCGTGCTGGGGCTC GACGACGTGGTCTTCCATCTGGCCATCACCCCAGACCGCGGTTACTGCATGTCGGTGCGCGGCTTGGCCCGCGAGCTCGC GTGCGCCTACGACCTGGACTTCGTCGACCCCGCCAGCAACTCGCGGGTGCCGCCGCTACCCATCGAGGGGCCAGTCTGGC CGCTGACGGTTCAGCCCGAGACGGGGGTGCGCCGGTTCGCGCTACGCCCGGTCATCGGGATCGACCCCGCCGCGGTATCG CCCTGGTGGTTGCAGCGCCGACTGCTGCTCTGCGGTATCCGCGCGACCTGTCCGGCGGTCGACGTGACCAATTACGTGAT GCTCGAACTTGGCCACCCCATGCACGCCCACGACCGCAACCGGATCAGCGGAACCCTCGGAGTGCGGTTCGCCCGGTCCG GCGAGACCGCCGTGACCCTCGACGGTATCGAGCGCAAGCTCGATACCGCCGATGTCCTGATCGTCGACGATGCTGCGACA GCGGCGATCGGCGGCGTGATGGGGGCGGCCAGCACCGAAGTGCGGGCCGACTCCACCGATGTCCTGTTGGAGGCCGCGAT ATGGGACCCGGCTGCGGTATCGCGTACCCAGCGGCGGCTGCACCTGCCTAGCGAGGCCGCCCGTCGTTACGAGCGGACGG TGGACCCGGCCATCTCCGTGGCCGCTTTGGACCGGTGCGCAAGGCTGCTCGCCGACATCGCCGGGGGGGAGGTTTCTCCC ACCCTTACCGACTGGCGGGGTGACCCGCCGTGTGATGACTGGTCACCGCCGCCGATCCGGATGGGAGTCGATGTGCCGGA CCGCATCGCCGGGGTGGCCTATCCGCAGGGCACTACTGCCAGGCGCTTGGCCCAGATCGGCGCGGTGGTGACCCACGACG GCGACACCTTGACCGTGACCCCGCCGAGTTGGCGACCTGATCTGCGGCAACCCGCAGACCTTGTCGAGGAGGTGCTGCGG CTTGAGGGGCTGGAAGTTATCCCGTCGGTGCTGCCACCGGCGCCCGCGGGTCGTGGACTCACCGCTGGGCAGCAGCGCCG TCGCACGATCGGCAGGTCGCTGGCGCTGTCGGGCTATGTCGAGATTCTGCCGACTCCATTTCTGCCGGCCGGTGTGTTCG ATTTGTGGGGGCTGGAAGCCGATGACTCACGGCGCATGACCACGCGGGTGCTCAACCCGCTGGAGGCCGATCGTCCGCAA CTGGCGACCACGCTGCTGCCGGCCCTGCTGGAAGCCTTGGTGCGCAACGTGTCCCGAGGGCTGGTCGACGTCGCGCTGTT CGCCATCGCCCAGGTGGTCCAGCCGACCGAGCAGACGCGCGGTGTCGGGTTGATCCCGGTTGACCGGCGGCCGACCGATG ATGAGATCGCCATGCTGGATGCCTCGCTGCCCCGGCAACCCCAGCACGTCGCGGCGGTGCTGGCCGGACTGCGCGAGCCT CGAGGCCCCTGGGGCCCGGGCCGCCCGGTAGAGGCGGCTGATGCGTTCGAGGCGGTGCGAATCATCGCGCGCGCCAGCCG CGTGGACGTGACCCTGCGGCCGGCCCAATATCTGCCGTGGCATCCGGGCCGGTGCGCGCAGGTGTTCGTCGGGGAAAGCT CGGTTGGTCACGCCGGGCAGCTGCATCCCGCCGTGATCGAGCGCTCGGGTCTGCCGAAAGGCACCTGCGCGGTGGAACTG AACCTAGATGCGATTCCGTGCAGCGCGCCGCTGCCGGCACCCAGGGTGTCGCCGTATCCGGCCGTGTTCCAAGACGTCAG CCTGGTGGTGGCCGCGGACATCCCCGCTCAGGCGGTGGCCGACGCCGTGCGCGCGGGGGCAGGCGACCTGCTGGAGGATA TTGCGTTGTTTGACGTGTTCACCGGCCCGCAGATTGGTGAGCACCGCAAGTCGCTGACCTTCGCGCTGCGGTTTCGTGCG CCGGATCGCACCTTAACCGAAGACGACGCCAGCGCCGCCCGCGATGCCGCTGTGCAAAGCGCAGCCGAACGGGTGGGTGC CGTGCTGCGTGGCTGA
Upstream 100 bases:
>100_bases GGTTGGAACGCACCCTGCAGTTTCGCAACGGCATTCCTGACATGCGCGACATGGTCGAAGGCGACGTCCGATTCTCGTTG CCGTTCGGGGTGGGTGCCTG
Downstream 100 bases:
>100_bases ACCGACTCAGCACGCGTTCAACGAAAATTTGACGACGGCATTTCAGCGCGCCGCGTTTATACCTCGCCGCCCTGTCCGGG TAGCGGCGCCGCCCTAAGGG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG
Sequences:
>Translated_831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG >Mature_831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain
Homologues:
Organism=Escherichia coli, GI1788006, Length=775, Percent_Identity=31.4838709677419, Blast_Score=332, Evalue=8e-92,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYFB_MYCBO (Q7VEV3)
Other databases:
- EMBL: BX248339 - RefSeq: NP_855330.1 - ProteinModelPortal: Q7VEV3 - SMR: Q7VEV3 - EnsemblBacteria: EBMYCT00000016698 - GeneID: 1092620 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1677 - GeneTree: EBGT00050000017529 - HOGENOM: HBG399638 - OMA: ADKLRVC - ProtClustDB: PRK00629 - BioCyc: MBOV233413:MB1677-MONOMER - BRENDA: 6.1.1.20 - GO: GO:0005737 - HAMAP: MF_00283 - InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 - Gene3D: G3DSA:3.50.40.10 - Gene3D: G3DSA:3.30.56.20 - Gene3D: G3DSA:3.30.70.380 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00873 - SMART: SM00874 - SMART: SM00896 - TIGRFAMs: TIGR00472
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind
EC number: =6.1.1.20
Molecular weight: Translated: 88403; Mature: 88403
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCCCHHH LTGYKKPIRACAVDIGDRQYREIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRN HHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCC SDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYCMSVR CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEHHH GLARELACAYDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPVIGIDPAAVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCC PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTL HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEE DGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRL CCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHEEEEHHCCCHHHHHHHHHC HLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPCDDWSPPPIR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE MGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR ECCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHH LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEA HCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHCCCCC DDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTR CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREPRGPWGPGRPVEAADAFEAVR CCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL HHHHHHHCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVF ECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHC TGPQIGEHRKSLTFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLRG CCCCHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCCCHHH LTGYKKPIRACAVDIGDRQYREIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRN HHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCC SDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYCMSVR CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEHHH GLARELACAYDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPVIGIDPAAVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCC PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTL HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEE DGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRL CCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHEEEEHHCCCHHHHHHHHHC HLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPCDDWSPPPIR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE MGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR ECCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHH LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEA HCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHCCCCC DDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTR CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREPRGPWGPGRPVEAADAFEAVR CCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL HHHHHHHCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVF ECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHC TGPQIGEHRKSLTFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLRG CCCCHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972