Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637556
Identifier: 121637556
GI number: 121637556
Start: 1862977
End: 1863783
Strand: Direct
Name: 121637556
Synonym: BCG_1687
Alternate gene names: NA
Gene position: 1862977-1863783 (Clockwise)
Preceding gene: 121637555
Following gene: 121637557
Centisome position: 42.59
GC content: 66.67
Gene sequence:
>807_bases ATGATCTACCGCGTCGCCTGCCTGCTGGCCCGGATCCGGTTCACCGTGGGCTACGTGGCGGCTCTTGCATCGGTCAGCAC CACCATCCTGATGCATGGTCCGCAGGTGCACGCCCAGGTGATTCGGCATGCCAGTACGAACCTGCACAACCTGGCCCATG GACACCTGGGAACGCTGTGGAACAGCGCCTTCGTCATCGACGAGGGCCCGCTTTATTTCTGGTTACCCTGCTTGGCGTGT CTGCTCGCGGTCGCGGAGCTGCAGCTGCGCAGCTTGCGGCTGACCGTGGCGTTCGTCGTCGGTCATATTGGGGCGACACT GTTGGTGGCGGCCGTGCTTGCCGGGGCGATCGAGATCGGCTGGTTGCCATGGTCCATTAGCCGGGTCAGCGATGTCGGGA TGAGCTACGGTGCCCTCGCGGCGCTCGGGGCGCTGACCGCGGCAATCCCTGGGCGGTGGCGGCCGGCATGGATTGGTTGG TGGGTATCGCTGGGCTTGGCGACTGCGACCATCGGCGGTGGTTTCACCGATGCCGGCCACACGGTTGCGTTGCTGTTGGG CATGTTAGTGACTGCCTGCTTCACCCGGCCCGCGCGCTGGACACTCGGGCGGTGTGCCTTGCTGGCGGTGGCGTCGGGGT TCTGCTTGGTGCTGCTAGCCCATAGCTGGTGGAGCTTGGTGAGTGGGTCGGCCTTGGGTCTACTCGGGGCCCTGGGTGCC GCCGGGTTTGCGCGTTGGACCAGAGCGCGCGCCACATCGCTGCCACCCGGCGCGCTGGCGATTCCGCAGCCGGCGCTAAG TCGCTGA
Upstream 100 bases:
>100_bases CATTCCGCCCGACTTGGCGATCTATCGCATCAAGACTGTTAGCGAGTCGACAGCTGCCGATAACTTCGATGAGATGAGTC CCGATGCACAGTAGAACGCG
Downstream 100 bases:
>100_bases GTCCCGCACAACGCGTGCCGAGCCGGGCCGACCGAATCACCTATGATTTGCACTTGCGTCACGCCGTTAGCGGGCAAGTC GGGTACGTCCATCAGTCCAG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWNSAFVIDEGPLYFWLPCLAC LLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGW WVSLGLATATIGGGFTDAGHTVALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGA AGFARWTRARATSLPPGALAIPQPALSR
Sequences:
>Translated_268_residues MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWNSAFVIDEGPLYFWLPCLAC LLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGW WVSLGLATATIGGGFTDAGHTVALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGA AGFARWTRARATSLPPGALAIPQPALSR >Mature_268_residues MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWNSAFVIDEGPLYFWLPCLAC LLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGW WVSLGLATATIGGGFTDAGHTVALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGA AGFARWTRARATSLPPGALAIPQPALSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28143; Mature: 28143
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCHHHHHHHHHHHHH NSAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIG CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WLPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGH CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH TVALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGFARWTRARATSLPPGALAIPQPALSR HHHHHHHHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCHHHHHHHHHHHHH NSAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIG CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WLPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGH CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH TVALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGFARWTRARATSLPPGALAIPQPALSR HHHHHHHHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA