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The map label for this gene is yibD [C]

Identifier: 121637439

GI number: 121637439

Start: 1721985

End: 1722944

Strand: Direct

Name: yibD [C]

Synonym: BCG_1570

Alternate gene names: 121637439

Gene position: 1721985-1722944 (Clockwise)

Preceding gene: 121637438

Following gene: 121637440

Centisome position: 39.36

GC content: 63.23

Gene sequence:

>960_bases
GTGGTGCCTGGTGATGCATCAAGCGTGGTATCGGTGAACCCGGCGAAACCGCTTATCTCGGTGTGCATCCCGATGTACAA
CAACGGCGCCACCATCGAGCGCTGTCTGCGTAGCATCCTCGAACAGGAGGGCGTCGAGTTCGAGATCGTGGTCGTTGACG
ACGACTCGTCCGACGACTGCGCCGCGATCGCCGCAACGATGCTGCGACCCGGAGACCGCTTGCTGCGAAATGAGCCTCGC
CTCGGCCTCAACCGAAACCACAACAAATGTCTGGAAGTCGCGCGCGGCGGACTTATTCAGTTCGTACATGGTGATGATCG
GCTGCTCCCCGGAGCCCTGCAGACACTCAGCCGACGTTTTGAGGATCCCAGTGTCGGAATGGCTTTCGCCCCCCGACGGG
TGGAGAGCGACGACATCAAGTGGCAACAACGGTACGGCAGGGTCCATACCCGTTTCCGCAAGCTGCGCGACCGCAACCAC
GGGCCGTCGCTGGTCTTGCAGATGGTATTGCACGGCGCGAAGGAAAATTGGATCGGCGAACCGACCGCCGTGATGTTTCG
GCGGCAATTGGCGCTGGACGCCGGTGGTTTTCGCACCGATATCTACCAGCTCGTCGATGTGGACTTCTGGCTTCGGTTGA
TGCTGAGGTCGGCGGTCTGCTTCGTTCCGCACGAGCTCTCGGTGCGCCGTCACACGGCGGCGACGGAGACCACACGGGTG
ATGGCGACTCGGCGCAACGTGCTGGACCGACAGCGCATTCTCACCTGGTTGATCGTGGACCCGTTGTCGCCCAACAGAGT
TCGCAGCGCCGCGGCGCTGTGGTGGATACCCGCATGGCTGGCCATGATCGTGGAGGTGGCCGTGCTCGGACCGCAGCGGC
GGACGCACTTGAAGGCTTTGGCGCCGGCCCCATTCCGCGAGTTCGCCCACGCCCGGCGTCAACTGCCGCTGGCTGACTAG

Upstream 100 bases:

>100_bases
ATTGGGTACGGTCCAATCGTCGGCAGATCTCCCTCACCATCCTGATAGGGGTCGGGTTCCTCTTTTTGTACCAGGGCGTG
ACTAGTCTCTGAGTCGCCAT

Downstream 100 bases:

>100_bases
CAGTCGCACTCTGCCTGGCCGTCGTCGGAGCCACAGACAATTCCAACCCATTTGGCCTGGCGGCCAAGATGACATTTTTA
CAAGGTAAGGCTAGCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MVPGDASSVVSVNPAKPLISVCIPMYNNGATIERCLRSILEQEGVEFEIVVVDDDSSDDCAAIAATMLRPGDRLLRNEPR
LGLNRNHNKCLEVARGGLIQFVHGDDRLLPGALQTLSRRFEDPSVGMAFAPRRVESDDIKWQQRYGRVHTRFRKLRDRNH
GPSLVLQMVLHGAKENWIGEPTAVMFRRQLALDAGGFRTDIYQLVDVDFWLRLMLRSAVCFVPHELSVRRHTAATETTRV
MATRRNVLDRQRILTWLIVDPLSPNRVRSAAALWWIPAWLAMIVEVAVLGPQRRTHLKALAPAPFREFAHARRQLPLAD

Sequences:

>Translated_319_residues
MVPGDASSVVSVNPAKPLISVCIPMYNNGATIERCLRSILEQEGVEFEIVVVDDDSSDDCAAIAATMLRPGDRLLRNEPR
LGLNRNHNKCLEVARGGLIQFVHGDDRLLPGALQTLSRRFEDPSVGMAFAPRRVESDDIKWQQRYGRVHTRFRKLRDRNH
GPSLVLQMVLHGAKENWIGEPTAVMFRRQLALDAGGFRTDIYQLVDVDFWLRLMLRSAVCFVPHELSVRRHTAATETTRV
MATRRNVLDRQRILTWLIVDPLSPNRVRSAAALWWIPAWLAMIVEVAVLGPQRRTHLKALAPAPFREFAHARRQLPLAD
>Mature_319_residues
MVPGDASSVVSVNPAKPLISVCIPMYNNGATIERCLRSILEQEGVEFEIVVVDDDSSDDCAAIAATMLRPGDRLLRNEPR
LGLNRNHNKCLEVARGGLIQFVHGDDRLLPGALQTLSRRFEDPSVGMAFAPRRVESDDIKWQQRYGRVHTRFRKLRDRNH
GPSLVLQMVLHGAKENWIGEPTAVMFRRQLALDAGGFRTDIYQLVDVDFWLRLMLRSAVCFVPHELSVRRHTAATETTRV
MATRRNVLDRQRILTWLIVDPLSPNRVRSAAALWWIPAWLAMIVEVAVLGPQRRTHLKALAPAPFREFAHARRQLPLAD

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36140; Mature: 36140

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPGDASSVVSVNPAKPLISVCIPMYNNGATIERCLRSILEQEGVEFEIVVVDDDSSDDC
CCCCCCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHH
AAIAATMLRPGDRLLRNEPRLGLNRNHNKCLEVARGGLIQFVHGDDRLLPGALQTLSRRF
HHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHC
EDPSVGMAFAPRRVESDDIKWQQRYGRVHTRFRKLRDRNHGPSLVLQMVLHGAKENWIGE
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
PTAVMFRRQLALDAGGFRTDIYQLVDVDFWLRLMLRSAVCFVPHELSVRRHTAATETTRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MATRRNVLDRQRILTWLIVDPLSPNRVRSAAALWWIPAWLAMIVEVAVLGPQRRTHLKAL
HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
APAPFREFAHARRQLPLAD
CCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVPGDASSVVSVNPAKPLISVCIPMYNNGATIERCLRSILEQEGVEFEIVVVDDDSSDDC
CCCCCCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHH
AAIAATMLRPGDRLLRNEPRLGLNRNHNKCLEVARGGLIQFVHGDDRLLPGALQTLSRRF
HHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHC
EDPSVGMAFAPRRVESDDIKWQQRYGRVHTRFRKLRDRNHGPSLVLQMVLHGAKENWIGE
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
PTAVMFRRQLALDAGGFRTDIYQLVDVDFWLRLMLRSAVCFVPHELSVRRHTAATETTRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MATRRNVLDRQRILTWLIVDPLSPNRVRSAAALWWIPAWLAMIVEVAVLGPQRRTHLKAL
HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
APAPFREFAHARRQLPLAD
CCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]