Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

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The map label for this gene is 121637434

Identifier: 121637434

GI number: 121637434

Start: 1716963

End: 1717784

Strand: Direct

Name: 121637434

Synonym: BCG_1565

Alternate gene names: NA

Gene position: 1716963-1717784 (Clockwise)

Preceding gene: 121637433

Following gene: 121637435

Centisome position: 39.25

GC content: 54.26

Gene sequence:

>822_bases
ATGATTCCTGTAAAGGTTGAAAACAATACTTCGCTCGATCAGGTGCAAGACGCTCTTAATTGCGTCGGGTACGCGGTTGT
AGAAGATGTGCTTGATGAGGCGTCACTGGCAGCGACCCGTGATCGCATGTATCGTGTACAGGAGCGGATTCTTACCGAGA
TTGGCAAAGAGCGGCTGGCAAGGGCCGGTGAGCTCGGTGTTCTTCGACTCATGATGAAGTATGACCCTCATTTCTTTACC
TTTCTTGAAATCCCCGAAGTCCTAAGCATCGTTGATCGTGTGCTATCTGAAACGGCCATCTTACATCTGCAGAATGGCTT
TATCCTTCCGTCCTTCCCGCCCTTCTCCACGCCGGACGTTTTTCAGAATGCGTTCCACCAAGACTTTCCCAGGGTTCTGT
CCGGTTACATTGCCTCCGTCAATATTATGTTCGCCATCGATCCCTTTACACGAGACACCGGCGCAACGCTCGTAGTGCCG
GGGAGCCACCAGCGCATAGAGAAACCGGACCATACCTACCTCGCGCGCAATGCCGTTCCCGTTCAATGCGCGGCGGGCTC
GTTGTTCGTTTTTGACTCTACGCTTTGGCATGCGGCTGGCCGAAACACCTCCGGCAAAGACCGCTTGGCCATAAATCATC
AGTTTACGCGCTCGTTTTTCAAGCAGCAGATCGACTACGTCCGCGCGCTGGGCGACGCCGTGGTTCTGGAGCAGCCTGCG
CGTACTCAGCAACTGCTCGGATGGTACAGTCGAGTGGTTACCAATCTGGACGAGTATTACCAGCCGCCGGACAAGCGATT
GTATCGGAAGGGGCAAGGCTAG

Upstream 100 bases:

>100_bases
CTCTGAAGACCGCCTTCCCGGCCGCGCACCTGTCGAACGGGAAACGCGTCACATCAGAGCCAGAGGGATTGGCAACTGGC
AACAGGTGAATAAGCGTAGC

Downstream 100 bases:

>100_bases
TTTTGCGAGAATTCCGTTGCGCCTATTTGAAAGCCCGACATGAAACGATCGCTTTTAAGCGCATATGTCTGTTCTGCAAA
AATGTCTAATTTTTCCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFT
FLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVP
GSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG

Sequences:

>Translated_273_residues
MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFT
FLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVP
GSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
>Mature_273_residues
MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLARAGELGVLRLMMKYDPHFFT
FLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDVFQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVP
GSHQRIEKPDHTYLARNAVPVQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1501_MYCTU (P67770)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   H70712
- RefSeq:   NP_216017.1
- RefSeq:   NP_336002.1
- ProteinModelPortal:   P67770
- EnsemblBacteria:   EBMYCT00000000917
- EnsemblBacteria:   EBMYCT00000071063
- GeneID:   886499
- GeneID:   924415
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1550
- KEGG:   mtu:Rv1501
- TIGR:   MT1550
- TubercuList:   Rv1501
- GeneTree:   EBGT00050000016922
- HOGENOM:   HBG569203
- OMA:   HRDLPYQ
- ProtClustDB:   CLSK791203
- InterPro:   IPR008775

Pfam domain/function: PF05721 PhyH

EC number: NA

Molecular weight: Translated: 30907; Mature: 30907

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
HCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEECCEECCCCCCCCCHHH
FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCE
VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
EEECCCCEEEEHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCH
RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MIPVKVENNTSLDQVQDALNCVGYAVVEDVLDEASLAATRDRMYRVQERILTEIGKERLA
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGELGVLRLMMKYDPHFFTFLEIPEVLSIVDRVLSETAILHLQNGFILPSFPPFSTPDV
HCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEECCEECCCCCCCCCHHH
FQNAFHQDFPRVLSGYIASVNIMFAIDPFTRDTGATLVVPGSHQRIEKPDHTYLARNAVP
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCE
VQCAAGSLFVFDSTLWHAAGRNTSGKDRLAINHQFTRSFFKQQIDYVRALGDAVVLEQPA
EEECCCCEEEEHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCH
RTQQLLGWYSRVVTNLDEYYQPPDKRLYRKGQG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036