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The map label for this gene is ybbK [C]

Identifier: 121637419

GI number: 121637419

Start: 1702470

End: 1703615

Strand: Direct

Name: ybbK [C]

Synonym: BCG_1550

Alternate gene names: 121637419

Gene position: 1702470-1703615 (Clockwise)

Preceding gene: 121637418

Following gene: 121637420

Centisome position: 38.92

GC content: 66.58

Gene sequence:

>1146_bases
GTGCAAGGAGCCGTTGCTGGTCTGGTGTTTCTGGCCGTCCTGGTGATTTTCGCCATCATCGTGGTGGCCAAGTCGGTGGC
GCTGATCCCGCAGGCGGAGGCCGCGGTGATCGAGCGGCTGGGTCGCTATAGTCGTACGGTCAGTGGGCAGTTGACGCTGT
TGGTGCCGTTCATCGACCGCGTCCGGGCTCGGGTGGACCTGCGCGAGCGGGTGGTGTCGTTTCCGCCGCAACCGGTGATC
ACCGAGGACAACTTGACGCTGAACATCGACACCGTCGTCTACTTCCAGGTGACCGTTCCGCAGGCGGCGGTGTACGAGAT
CAGCAATTACATCGTCGGGGTCGAACAGCTCACCACCACCACCCTGCGCAACGTTGTCGGCGGGATGACGCTGGAGCAGA
CGTTGACCTCGCGTGACCAGATCAACGCCCAGCTGCGCGGCGTTCTCGATGAGGCGACCGGCCGCTGGGGTCTGCGGGTG
GCGCGGGTGGAGCTGCGCAGCATCGATCCGCCGCCGTCGATTCAGGCGTCGATGGAAAAGCAGATGAAGGCCGACCGGGA
GAAGCGAGCGATGATTCTGACCGCCGAAGGTACCCGGGAGGCGGCGATAAAACAGGCCGAGGGGCAAAAGCAGGCGCAGA
TCCTGGCCGCCGAGGGCGCCAAGCAGGCCGCGATCTTGGCTGCTGAGGCCGATCGGCAGTCTCGGATGCTGCGCGCTCAG
GGTGAGCGCGCCGCGGCCTACCTGCAGGCGCAAGGGCAGGCCAAGGCCATCGAGAAGACGTTCGCCGCGATCAAGGCTGG
CCGGCCCACCCCGGAGATGCTGGCCTACCAATACCTGCAGACGCTGCCGGAGATGGCGCGTGGGGACGCCAACAAGGTAT
GGGTGGTGCCCAGCGACTTCAACGCCGCACTGCAGGGGTTCACCAGGCTGCTGGGCAAGCCGGGTGAGGACGGGGTGTTC
CGGTTCGAGCCGTCCCCGGTCGAAGACCAGCCCAAGCACGCGGCCGACGGTGACGACGCCGAGGTCGCCGGCTGGTTCTC
CACCGATACCGACCCGTCGATCGCTCGGGCGGTGGCTACAGCCGAGGCGATAGCCCGCAAGCCGGTCGAGGGTTCGCTGG
GGACGCCCCCCAGGTTGACTCAATAG

Upstream 100 bases:

>100_bases
TGATGTGTTCGAACCTGGTGACTCGGTGACCGTGGTGCAAATCGACGGCGCCACGGCGGTGGTCTTCAAGGACGTGTAGG
GACTCGAGAAAGGAATTCCG

Downstream 100 bases:

>100_bases
AGTGGTCCGATGAGTGGTTTGACCTCACCGAAAACCTATGCGGTACTGGCAGCTCTGCAGGCGGGCGACGCGGTGGCGTG
CGCCATCCCGCTGCCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MQGAVAGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFNAALQGFTRLLGKPGEDGVF
RFEPSPVEDQPKHAADGDDAEVAGWFSTDTDPSIARAVATAEAIARKPVEGSLGTPPRLTQ

Sequences:

>Translated_381_residues
MQGAVAGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFNAALQGFTRLLGKPGEDGVF
RFEPSPVEDQPKHAADGDDAEVAGWFSTDTDPSIARAVATAEAIARKPVEGSLGTPPRLTQ
>Mature_381_residues
MQGAVAGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQASMEKQMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDFNAALQGFTRLLGKPGEDGVF
RFEPSPVEDQPKHAADGDDAEVAGWFSTDTDPSIARAVATAEAIARKPVEGSLGTPPRLTQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=41.8367346938776, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI21686995, Length=215, Percent_Identity=37.2093023255814, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI221316744, Length=215, Percent_Identity=37.2093023255814, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI38016911, Length=209, Percent_Identity=33.9712918660287, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI7657615, Length=188, Percent_Identity=24.468085106383, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI20149563, Length=164, Percent_Identity=28.6585365853659, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786697, Length=309, Percent_Identity=37.5404530744337, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1790616, Length=208, Percent_Identity=26.4423076923077, Blast_Score=61, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI32564147, Length=282, Percent_Identity=35.4609929078014, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569493, Length=303, Percent_Identity=30.6930693069307, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=207, Percent_Identity=36.231884057971, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987612, Length=207, Percent_Identity=36.231884057971, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17570161, Length=238, Percent_Identity=31.9327731092437, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=238, Percent_Identity=31.9327731092437, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=201, Percent_Identity=31.8407960199005, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71987621, Length=205, Percent_Identity=35.1219512195122, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17569499, Length=182, Percent_Identity=35.1648351648352, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=203, Percent_Identity=32.0197044334975, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71989948, Length=158, Percent_Identity=37.9746835443038, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71989955, Length=158, Percent_Identity=37.9746835443038, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17570459, Length=203, Percent_Identity=33.9901477832512, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550506, Length=278, Percent_Identity=33.4532374100719, Blast_Score=161, Evalue=9e-40,
Organism=Drosophila melanogaster, GI281361633, Length=203, Percent_Identity=33.0049261083744, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI281361631, Length=203, Percent_Identity=33.0049261083744, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI18860517, Length=205, Percent_Identity=35.1219512195122, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI21356845, Length=196, Percent_Identity=31.6326530612245, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI281365664, Length=202, Percent_Identity=37.1287128712871, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24657857, Length=202, Percent_Identity=37.1287128712871, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI62484448, Length=202, Percent_Identity=37.1287128712871, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI62484274, Length=202, Percent_Identity=37.1287128712871, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI45556022, Length=200, Percent_Identity=35, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28573263, Length=206, Percent_Identity=32.5242718446602, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI281361635, Length=142, Percent_Identity=35.2112676056338, Blast_Score=92, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1488_MYCTU (P63693)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   C70711
- RefSeq:   NP_216004.1
- RefSeq:   NP_335986.1
- ProteinModelPortal:   P63693
- SMR:   P63693
- EnsemblBacteria:   EBMYCT00000003289
- EnsemblBacteria:   EBMYCT00000072932
- GeneID:   886515
- GeneID:   924413
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1533.2
- KEGG:   mtu:Rv1488
- TIGR:   MT1533.2
- TubercuList:   Rv1488
- GeneTree:   EBGT00050000014992
- HOGENOM:   HBG714701
- OMA:   ATYEVAS
- ProtClustDB:   CLSK791194
- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972
- PANTHER:   PTHR10264
- PRINTS:   PR00721
- SMART:   SM00244

Pfam domain/function: PF01145 Band_7

EC number: NA

Molecular weight: Translated: 41283; Mature: 41283

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS01270 BAND_7; PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15b85598)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGAVAGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
VRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
HHHHCHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
NAALQGFTRLLGKPGEDGVFRFEPSPVEDQPKHAADGDDAEVAGWFSTDTDPSIARAVAT
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
AEAIARKPVEGSLGTPPRLTQ
HHHHHCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MQGAVAGLVFLAVLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
VRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGTREAAIKQAEGQKQAQILAAEGAKQAAILAAEADRQSRMLRAQ
HHHHCHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHC
GERAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQTLPEMARGDANKVWVVPSDF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
NAALQGFTRLLGKPGEDGVFRFEPSPVEDQPKHAADGDDAEVAGWFSTDTDPSIARAVAT
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
AEAIARKPVEGSLGTPPRLTQ
HHHHHCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036