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The map label for this gene is ydiF [H]

Identifier: 121637403

GI number: 121637403

Start: 1685728

End: 1687356

Strand: Direct

Name: ydiF [H]

Synonym: BCG_1534

Alternate gene names: 121637403

Gene position: 1685728-1687356 (Clockwise)

Preceding gene: 121637402

Following gene: 121637404

Centisome position: 38.54

GC content: 67.03

Gene sequence:

>1629_bases
GTGATCACAGCTACGGACCTCGAGGTCCGCGCTGGCGCGCGCATCCTGCTCGCACCCGACGGCCCCGACCTGCGTGTGCA
GCCCGGCGATCGTATCGGGCTGGTCGGACGTAACGGTGCCGGCAAGACCACCACGCTGCGCATTCTGGCGGGGGAGGTCG
AACCCTATGCCGGGTCGGTTACCCGTGCCGGCGAAATCGGCTACCTGCCACAGGATCCCAAAGTTGGCGATCTCGACGTG
CTGGCCCGTGACCGGGTGCTGTCCGCCCGCGGACTGGACGTCCTGCTCACTGATCTGGAGAAGCAGCAGGCGTTGATGGC
CGAGGTCGCCGACGAGGACGAGCGTGACCGCGCCATCCGCCGTTACGGTCAGCTCGAGGAGCGATTCGTCGCGCTGGGCG
GCTATGGCGCCGAAAGCGAAGCCGGCCGCATCTGCGCCAGCCTAGGCTTGCCCGAGCGGGTGCTGACCCAGCGGCTGCGT
ACCCTTTCCGGAGGTCAGCGCCGCCGGGTGGAACTAGCCCGCATTTTGTTCGCCGCGTCCGAGAGTGGCGCTGGAAATTC
CACCACCTTGTTGCTCGACGAGCCGACTAACCACCTCGACGCTGATTCGCTGGGCTGGCTGCGGGACTTCCTGCGCTTGC
ATACGGGCGGGCTGGTGGTCATCAGCCACAACGTGGACCTGGTGGCCGATGTCGTCAATAAAGTGTGGTTCCTGGATGCC
GTGCGCGGCCAGGTCGATGTTTACAACATGGGCTGGCAGCGCTACGTCGACGCTCGGGCCACCGACGAGCAACGTCGCAT
CCGGGAACGCGCTAACGCCGAACGCAAGGCGGCCGCGCTGCGTGCACAGGCCGCCAAGTTGGGCGCCAAGGCCACCAAAG
CCGTTGCGGCCCAGAACATGTTGCGCCGCGCCGATCGGATGATGGCCGCACTCGACGAGGAGCGAGTCGCCGACAAGGTG
GCCCGGATCAAGTTCCCCACCCCGGCGGCGTGTGGACGCACACCGCTGGTGGCCAACGGTCTGGGCAAGACGTATGGCTC
GCTGGAAGTCTTCACCGGTGTCGACTTGGCCATCGACCGCGGCTCGCGGGTGGTCATACTCGGACTCAACGGTGCCGGCA
AGACCACGCTGCTGCGATTGCTGGCCGGTGTCGAGCAGCCCGACACCGGAGTGCTGGAACCCGGATACGGTTTACGGATC
GGCTATTTCGCGCAAGAGCACGACACGCTCGACAACGATGCCACCGTTTGGGAGAACGTCCGGCACGCGGCACCGGATGC
CGGCGAACAGGACCTGCGCGGCCTGCTGGGTGCGTTCATGTTCACCGGTCCGCAGCTCGAGCAGCCGGCCGGCACGCTCT
CCGGCGGTGAGAAGACCCGGCTCGCGCTGGCCGGCTTGGTGGCCTCCACCGCGAATGTGCTGCTGCTCGATGAACCGACC
AACAATCTCGATCCGGCCTCGCGCGAGCAGGTGCTCGACGCGCTGCGCAGCTACCGAGGTGCGGTGGTGCTGGTGACGCA
TGATCCCGGGGCGGCCGCGGCGCTCGGTCCCCAACGGGTGGTGCTGTTGCCCGACGGCACCGAGGACTACTGGTCCGACG
AGTATCGAGATCTCATCGAGCTGGCCTGA

Upstream 100 bases:

>100_bases
ACTTCGAAGAAGCGGTTGCCGCACGGGCCGAGCAGCGGGCGCCGGTGTTCACCGATGACACGTAACAGCGCCCAAGACAA
CCGACGACCAGGGAGCGAAT

Downstream 100 bases:

>100_bases
CCTAGATGCGGCTGCCGCGTAACGATTTCGGCCAAAGCACCACCGGGGCGGCGGCGGGTTCTTAGGCTAGGTGCCTGGGA
TCGACGGAGGGTACCGATGC

Product: putative macrolide-transport ATP-binding protein ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLR
TLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDA
VRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKV
ARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRI
GYFAQEHDTLDNDATVWENVRHAAPDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA

Sequences:

>Translated_542_residues
MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLR
TLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDA
VRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKV
ARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRI
GYFAQEHDTLDNDATVWENVRHAAPDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA
>Mature_542_residues
MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEIGYLPQDPKVGDLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLR
TLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDA
VRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKV
ARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRI
GYFAQEHDTLDNDATVWENVRHAAPDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPT
NNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=510, Percent_Identity=30.9803921568627, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI10947137, Length=495, Percent_Identity=30.1010101010101, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI27881506, Length=495, Percent_Identity=30.1010101010101, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI10947135, Length=501, Percent_Identity=32.3353293413174, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI69354671, Length=501, Percent_Identity=32.3353293413174, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI116734710, Length=244, Percent_Identity=29.5081967213115, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI31657092, Length=201, Percent_Identity=30.8457711442786, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI105990541, Length=176, Percent_Identity=32.9545454545455, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1787041, Length=548, Percent_Identity=30.2919708029197, Blast_Score=244, Evalue=7e-66,
Organism=Escherichia coli, GI1789751, Length=514, Percent_Identity=32.8793774319066, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI2367384, Length=495, Percent_Identity=32.3232323232323, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=29.4234592445328, Blast_Score=188, Evalue=7e-49,
Organism=Escherichia coli, GI87081782, Length=544, Percent_Identity=25.9191176470588, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787758, Length=187, Percent_Identity=32.0855614973262, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=32.093023255814, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=34.4497607655502, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=30.8333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=32.5688073394495, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1788225, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788165, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=30.9644670050761, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787792, Length=210, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787712, Length=226, Percent_Identity=30.5309734513274, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789873, Length=193, Percent_Identity=33.160621761658, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994943, Length=181, Percent_Identity=33.1491712707182, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1790525, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786253, Length=186, Percent_Identity=30.6451612903226, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787105, Length=203, Percent_Identity=32.0197044334975, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786698, Length=197, Percent_Identity=29.4416243654822, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1790467, Length=198, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI48995001, Length=196, Percent_Identity=29.0816326530612, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=186, Percent_Identity=30.1075268817204, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=491, Percent_Identity=27.9022403258656, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17559834, Length=520, Percent_Identity=28.0769230769231, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17553372, Length=549, Percent_Identity=29.5081967213115, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17565586, Length=209, Percent_Identity=29.6650717703349, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=237, Percent_Identity=27.0042194092827, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=290, Percent_Identity=24.4827586206897, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=205, Percent_Identity=28.2926829268293, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=205, Percent_Identity=28.2926829268293, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=223, Percent_Identity=28.6995515695067, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=29.2364990689013, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320874, Length=506, Percent_Identity=29.0513833992095, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6324314, Length=172, Percent_Identity=34.3023255813954, Blast_Score=84, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6323278, Length=164, Percent_Identity=31.7073170731707, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24642252, Length=497, Percent_Identity=30.1810865191147, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI18859989, Length=497, Percent_Identity=30.1810865191147, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24641342, Length=517, Percent_Identity=31.9148936170213, Blast_Score=195, Evalue=8e-50,
Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=30.1158301158301, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI116007184, Length=183, Percent_Identity=33.879781420765, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221500365, Length=183, Percent_Identity=33.879781420765, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=31.9047619047619, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582014, Length=195, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24582012, Length=195, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643674, Length=232, Percent_Identity=28.8793103448276, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221512771, Length=214, Percent_Identity=28.5046728971963, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI281363262, Length=199, Percent_Identity=28.1407035175879, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58425; Mature: 58425

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSV
CCCCCCEEECCCCEEEECCCCCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC
TRAGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAAS
HHCCHHHHEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
ESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDA
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
VRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNM
HCCCEEEEECCHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCEEEEEC
GSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHDTLDNDATVWENV
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RHAAPDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPT
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
NNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIE
CCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHCCHHHHHHHH
LA
CC
>Mature Secondary Structure
MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSV
CCCCCCEEECCCCEEEECCCCCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC
TRAGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAAS
HHCCHHHHEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
ESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDA
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
VRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNM
HCCCEEEEECCHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCEEEEEC
GSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHDTLDNDATVWENV
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RHAAPDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPT
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
NNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIE
CCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHCCHHHHHHHH
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]