Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is p49 [H]
Identifier: 121637362
GI number: 121637362
Start: 1634637
End: 1636058
Strand: Direct
Name: p49 [H]
Synonym: BCG_1493
Alternate gene names: 121637362
Gene position: 1634637-1636058 (Clockwise)
Preceding gene: 121637361
Following gene: 121637363
Centisome position: 37.37
GC content: 69.97
Gene sequence:
>1422_bases ATGACGACCGCGGTCGTCGTCGGAGCCGGGCCCAACGGCCTGGCCGCGGCGATCCACCTGGCCCGTCACGGTGTCGACGT GCAGGTGCTGGAGGCGCGCGACACCATCGGCGGGGGAGCACGCTCCGGTGAGCTGACGGTGCCCGGGGTCATCCACGACC ACTGTTCGGCGTTTCATCCGCTGGGCGTCGGGTCGCCATTCTGGGCGGCGATCGACCTGCAACGCTACGGGCTGACGTGG AAGTGGCCGGACGTCGACTGCGCACACCCACTCGATGACGGCACCGCGGGCGTGCTATATCGGTCGATCGAAGCCACCGC CGCCGGCCTGGGTCCCGACGGCAAGCGGTGGCAGCGCGCCGTGGGTGACCTCGCCGCCGGATTCGATGAGCTGGCCGAGG ATCTGCTGCGCCCGGTGCTCAACATGCCGCGTCACCCGATCCGCCTGGCCCGCTTTGGTCCGCGCGCGGCGCTGCCGGCC ACCGCCATGGCGCGTCGGTTTCACACCGAGCGGGCGCGCGCGTTGTTCGGCGGCGCCGCGGCGCACGTCTACACCAGGTT GGATCGGCCGCTGACCGCGTCGCTGGGGTTGATGATCCTGGCCAGCGGCCATCGCCACGGTTGGCCGGTCGCCCGGGGCG GATCCGGGTCGATCACGAAGGCGCTGGCCGCGGCCCTGGACGCGTACGGCGGCACCGTCGCCACCGGGGTGACCGTCACC AGCCGCCGCGACATCCCCGACGCCGACATCGTGATGCTCGACCTCAGCCCGGCCGCGGTGCTCGGGATCTACGGCGATGT GATGCCCACCCGCATCAACCGGTCCTATCGGCGCTACCGCGCCGGATCGTCGGCCTTCAAGGTCGACTTCGCCATCGAGG GCGACGTTGGGTGGACCAACCCCGATTGCCGGCGCGCGGGCACCGTCCACCTGGGCGGGACCTTCGCGGAAATCGCAGAC ACCGAACGTCAACGCGCCCAAGGCACGATGGTGCAGCGACCATTCGTGCTCGTCGGGCAGCAGTACCTCGCCGACCCGTC CCGCTCGGTCGGCAACATCAACCCCATCTGGGCCTACGCGCACGTGCCGTTCGGCTACACCGGCGACGCCACCGCCGCCG TCATCGACCAGATCGAGCGGTTCGCCCCCGGATTCCGCGACCGCATCGTGGCAACCGTCAGCACCTCCACCACCGAACTG CAAACGTACAACCGCAACTTCATCGGCGGAGACATTATCGGCGGCGCCAACGACCGGCTGCAGGTCATCTTCCGCCCGCG CGTGGCCGTCGATCCGTATGCGATCGGTGTGCCGGGTGTCTATCTGTGTTCACAGTCCGCGCCACCCGGTGCCGGGATCC ACGGATTGTGTGGCTACCACGCCGCCGAATCGGCGCTGAGGTGGCTGCGCAAGCGACGTTGA
Upstream 100 bases:
>100_bases ACGTCACGGTCGAGGACATGTTGAGCCGCCAGCCATGGCCCGAGCCCGGTGACGAGTTCCCGGTTCACGTCACGACGCAA CGCGGCACGCCGTCAAAGCC
Downstream 100 bases:
>100_bases CGCAGGTCATCGCCGAGATCGACGTTAGCGCGACGTCCACTCGTGCCGTAGCCAAAACGTGACGGAGGTTTGATCGAATT GCTAAGGCGCGCCTGCACTT
Product: putative dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTTAVVVGAGPNGLAAAIHLARHGVDVQVLEARDTIGGGARSGELTVPGVIHDHCSAFHPLGVGSPFWAAIDLQRYGLTW KWPDVDCAHPLDDGTAGVLYRSIEATAAGLGPDGKRWQRAVGDLAAGFDELAEDLLRPVLNMPRHPIRLARFGPRAALPA TAMARRFHTERARALFGGAAAHVYTRLDRPLTASLGLMILASGHRHGWPVARGGSGSITKALAAALDAYGGTVATGVTVT SRRDIPDADIVMLDLSPAAVLGIYGDVMPTRINRSYRRYRAGSSAFKVDFAIEGDVGWTNPDCRRAGTVHLGGTFAEIAD TERQRAQGTMVQRPFVLVGQQYLADPSRSVGNINPIWAYAHVPFGYTGDATAAVIDQIERFAPGFRDRIVATVSTSTTEL QTYNRNFIGGDIIGGANDRLQVIFRPRVAVDPYAIGVPGVYLCSQSAPPGAGIHGLCGYHAAESALRWLRKRR
Sequences:
>Translated_473_residues MTTAVVVGAGPNGLAAAIHLARHGVDVQVLEARDTIGGGARSGELTVPGVIHDHCSAFHPLGVGSPFWAAIDLQRYGLTW KWPDVDCAHPLDDGTAGVLYRSIEATAAGLGPDGKRWQRAVGDLAAGFDELAEDLLRPVLNMPRHPIRLARFGPRAALPA TAMARRFHTERARALFGGAAAHVYTRLDRPLTASLGLMILASGHRHGWPVARGGSGSITKALAAALDAYGGTVATGVTVT SRRDIPDADIVMLDLSPAAVLGIYGDVMPTRINRSYRRYRAGSSAFKVDFAIEGDVGWTNPDCRRAGTVHLGGTFAEIAD TERQRAQGTMVQRPFVLVGQQYLADPSRSVGNINPIWAYAHVPFGYTGDATAAVIDQIERFAPGFRDRIVATVSTSTTEL QTYNRNFIGGDIIGGANDRLQVIFRPRVAVDPYAIGVPGVYLCSQSAPPGAGIHGLCGYHAAESALRWLRKRR >Mature_472_residues TTAVVVGAGPNGLAAAIHLARHGVDVQVLEARDTIGGGARSGELTVPGVIHDHCSAFHPLGVGSPFWAAIDLQRYGLTWK WPDVDCAHPLDDGTAGVLYRSIEATAAGLGPDGKRWQRAVGDLAAGFDELAEDLLRPVLNMPRHPIRLARFGPRAALPAT AMARRFHTERARALFGGAAAHVYTRLDRPLTASLGLMILASGHRHGWPVARGGSGSITKALAAALDAYGGTVATGVTVTS RRDIPDADIVMLDLSPAAVLGIYGDVMPTRINRSYRRYRAGSSAFKVDFAIEGDVGWTNPDCRRAGTVHLGGTFAEIADT ERQRAQGTMVQRPFVLVGQQYLADPSRSVGNINPIWAYAHVPFGYTGDATAAVIDQIERFAPGFRDRIVATVSTSTTELQ TYNRNFIGGDIIGGANDRLQVIFRPRVAVDPYAIGVPGVYLCSQSAPPGAGIHGLCGYHAAESALRWLRKRR
Specific function: Unknown
COG id: COG1233
COG function: function code Q; Phytoene dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50477; Mature: 50346
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVVVGAGPNGLAAAIHLARHGVDVQVLEARDTIGGGARSGELTVPGVIHDHCSAFHP CCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHCCCC LGVGSPFWAAIDLQRYGLTWKWPDVDCAHPLDDGTAGVLYRSIEATAAGLGPDGKRWQRA CCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCHHHHEEHHHHHHCCCCCCHHHHHHH VGDLAAGFDELAEDLLRPVLNMPRHPIRLARFGPRAALPATAMARRFHTERARALFGGAA HHHHHCCHHHHHHHHHHHHHHCCCCCEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH AHVYTRLDRPLTASLGLMILASGHRHGWPVARGGSGSITKALAAALDAYGGTVATGVTVT HHHHHHCCCCHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECEEEE SRRDIPDADIVMLDLSPAAVLGIYGDVMPTRINRSYRRYRAGSSAFKVDFAIEGDVGWTN CCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC PDCRRAGTVHLGGTFAEIADTERQRAQGTMVQRPFVLVGQQYLADPSRSVGNINPIWAYA CCHHCCCEEEECCCHHHHHHHHHHHHCCCHHCCCHHEECHHHHCCCCCCCCCCCCEEEEE HVPFGYTGDATAAVIDQIERFAPGFRDRIVATVSTSTTELQTYNRNFIGGDIIGGANDRL ECCCCCCCCHHHHHHHHHHHHCCCCHHCEEEEEECCCHHHHHCCCCCCCCCEECCCCCCE QVIFRPRVAVDPYAIGVPGVYLCSQSAPPGAGIHGLCGYHAAESALRWLRKRR EEEEECCEEECCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTAVVVGAGPNGLAAAIHLARHGVDVQVLEARDTIGGGARSGELTVPGVIHDHCSAFHP CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHCCCC LGVGSPFWAAIDLQRYGLTWKWPDVDCAHPLDDGTAGVLYRSIEATAAGLGPDGKRWQRA CCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCHHHHEEHHHHHHCCCCCCHHHHHHH VGDLAAGFDELAEDLLRPVLNMPRHPIRLARFGPRAALPATAMARRFHTERARALFGGAA HHHHHCCHHHHHHHHHHHHHHCCCCCEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH AHVYTRLDRPLTASLGLMILASGHRHGWPVARGGSGSITKALAAALDAYGGTVATGVTVT HHHHHHCCCCHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECEEEE SRRDIPDADIVMLDLSPAAVLGIYGDVMPTRINRSYRRYRAGSSAFKVDFAIEGDVGWTN CCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC PDCRRAGTVHLGGTFAEIADTERQRAQGTMVQRPFVLVGQQYLADPSRSVGNINPIWAYA CCHHCCCEEEECCCHHHHHHHHHHHHCCCHHCCCHHEECHHHHCCCCCCCCCCCCEEEEE HVPFGYTGDATAAVIDQIERFAPGFRDRIVATVSTSTTELQTYNRNFIGGDIIGGANDRL ECCCCCCCCHHHHHHHHHHHHCCCCHHCEEEEEECCCHHHHHCCCCCCCCCEECCCCCCE QVIFRPRVAVDPYAIGVPGVYLCSQSAPPGAGIHGLCGYHAAESALRWLRKRR EEEEECCEEECCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3453116 [H]