Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is ribA2 [H]
Identifier: 121637345
GI number: 121637345
Start: 1615185
End: 1616462
Strand: Direct
Name: ribA2 [H]
Synonym: BCG_1476
Alternate gene names: 121637345
Gene position: 1615185-1616462 (Clockwise)
Preceding gene: 121637344
Following gene: 121637346
Centisome position: 36.92
GC content: 64.16
Gene sequence:
>1278_bases ATGACGAGGTTGGACTCCGTCGAGCGGGCGGTTGCCGACATTGCGGCGGGTAAGGCCGTCATCGTCATCGACGACGAAGA CCGGGAGAACGAGGGTGACCTGATCTTCGCCGCCGAGAAGGCAACGCCGGAGATGGTGGCCTTCATGGTCCGCTACACCT CCGGATACCTGTGCGTTCCGCTGGACGGTGCCATCTGCGACCGGCTGGGCCTGTTGCCCATGTACGCGGTGAACCAGGAC AAGCACGGGACGGCATACACCGTCACAGTCGATGCACGGAATGGCATTGGAACTGGCATTTCGGCGTCCGATCGGGCTAC CACCATGCGGTTGCTGGCCGATCCGACCAGTGTGGCCGACGATTTCACCCGCCCCGGTCACGTGGTCCCCTTGCGGGCCA AGGATGGTGGGGTTCTGCGCCGGCCCGGCCACACCGAGGCCGCCGTGGACCTGGCCCGGATGGCCGGGCTGCAACCCGCG GGGGCGATTTGCGAGATCGTCAGCCAAAAAGATGAGGGCTCGATGGCGCACACCGATGAATTGCGGGTGTTCGCCGATGA GCACGGTCTGGCGCTGATCACCATTGCTGACTTGATCGAATGGCGGCGCAAGCACGAGAAGCACATTGAGCGGGTCGCCG AGGCGCGGATTCCGACTCGTCATGGGGAGTTTCGCGCCATCGGCTACACCAGCATCTACGAGGACGTGGAACATGTCGCG CTGGTCCGCGGCGAGATCGCCGGGCCCAACGCCGACGGTGACGACGTGCTGGTCCGGGTGCATTCGGAGTGCTTGACCGG CGATGTGTTTGGGTCACGCCGCTGCGATTGCGGGCCTCAGCTGGACGCCGCGCTGGCGATGGTCGCCCGTGAGGGGCGCG GCGTGGTGCTGTACATGCGTGGCCACGAGGGCCGCGGCATCGGCCTGATGCACAAACTGCAGGCCTACCAACTGCAGGAC GCCGGTGCCGACACCGTTGACGCCAATCTCAAGCTTGGACTACCTGCCGACGCAAGGGATTACGGGATCGGCGCACAGAT CCTGGTCGATCTTGGGGTACGTTCGATGAGGCTGCTGACCAACAACCCGGCCAAGCGGGTGGGACTGGATGGATACGGAT TGCACATCATCGAGCGCGTGCCGCTGCCGGTGCGGGCCAACGCGGAGAACATCCGTTACCTGATGACCAAGCGTGACAAA TTGGGGCACGACTTGGCTGGGTTGGACGATTTTCACGAATCCGTGCATCTGCCCGGAGAATTCGGCGGTGCCTTGTGA
Upstream 100 bases:
>100_bases GTCGCACTTGGTCACGGCAATACCGCCTGGCTCAATGGTTCATACTGAATGGAACACGTGGGCTTCGCGTGCGGCCAGGC CTGACAGCTAGGTAGCAAAG
Downstream 100 bases:
>100_bases AGGGTGGCGCCGGGGTGCCGGATCTGCCGTCGCTGGATGCGTCTGGTGTGCGGCTGGCGATTGTCGCCAGCAGCTGGCAC GGAAAGATCTGCGACGCGCT
Product: bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein
Products: NA
Alternate protein names: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; GTP cyclohydrolase-2; GTP cyclohydrolase II [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAVNQD KHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPA GAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVA LVRGEIAGPNADGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMRGHEGRGIGLMHKLQAYQLQD AGADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDK LGHDLAGLDDFHESVHLPGEFGGAL
Sequences:
>Translated_425_residues MTRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAVNQD KHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPA GAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVA LVRGEIAGPNADGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMRGHEGRGIGLMHKLQAYQLQD AGADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDK LGHDLAGLDDFHESVHLPGEFGGAL >Mature_424_residues TRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAVNQDK HGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAG AICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVAL VRGEIAGPNADGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMRGHEGRGIGLMHKLQAYQLQDA GADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKL GHDLAGLDDFHESVHLPGEFGGAL
Specific function: Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate [H]
COG id: COG0807
COG function: function code H; GTP cyclohydrolase II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the GTP cyclohydrolase II family [H]
Homologues:
Organism=Escherichia coli, GI1787533, Length=198, Percent_Identity=52.5252525252525, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1789420, Length=206, Percent_Identity=46.1165048543689, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320695, Length=204, Percent_Identity=46.5686274509804, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6319438, Length=174, Percent_Identity=47.7011494252874, Blast_Score=137, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017945 - InterPro: IPR000422 - InterPro: IPR000926 - InterPro: IPR016299 [H]
Pfam domain/function: PF00926 DHBP_synthase; PF00925 GTP_cyclohydro2 [H]
EC number: =4.1.99.12; =3.5.4.25 [H]
Molecular weight: Translated: 46018; Mature: 45887
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVP CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE LDGAICDRLGLLPMYAVNQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVAD CCHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHH DFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDE HCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC LRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVA EEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH LVRGEIAGPNADGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMR HHHCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GHEGRGIGLMHKLQAYQLQDAGADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLT CCCCCCCHHHHHHHHHHHCCCCCCEECCCEEECCCCCCHHCCCCHHHHHHHCCHHEEHHC NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKLGHDLAGLDDFHESVHLPGE CCCHHHCCCCCCCEEEEEECCCCEECCCCHHEEEEECCHHHCCCCCCCHHHHHHCCCCHH FGGAL CCCCC >Mature Secondary Structure TRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVP CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE LDGAICDRLGLLPMYAVNQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVAD CCHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCHHHHH DFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDE HCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC LRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVA EEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH LVRGEIAGPNADGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMR HHHCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GHEGRGIGLMHKLQAYQLQDAGADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLT CCCCCCCHHHHHHHHHHHCCCCCCEECCCEEECCCCCCHHCCCCHHHHHHHCCHHEEHHC NNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKLGHDLAGLDDFHESVHLPGE CCCHHHCCCCCCCEEEEEECCCCEECCCCHHEEEEECCHHHCCCCCCCHHHHHHCCCCHH FGGAL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA