Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637306
Identifier: 121637306
GI number: 121637306
Start: 1574308
End: 1575801
Strand: Direct
Name: 121637306
Synonym: BCG_1437
Alternate gene names: NA
Gene position: 1574308-1575801 (Clockwise)
Preceding gene: 121637305
Following gene: 121637309
Centisome position: 35.99
GC content: 66.73
Gene sequence:
>1494_bases ATGACGGCCTGCGGCAGGATTGTCGTCACCGCTGGGCCCACGATTAGCGCCGCGGACATCCGCTCGGTGGTGCCGGATGC CGAGGTGGCGCCGCCGATTGCGTTTGGCCAGGCGCTCTCCTATGACTTGCGGTCGGGTGACACGCTGCTGATTGTCGACG GATTGTTCTTTCAGCAGCCGTCGGTTCGACATAAGGAGCTTTTGACGTTGATGGCCGACGGTGTCCGAGTCGTCGGATCG TCGAGCATGGGCGCCCTGCGGGCCGCTGAGCTGCATCCATTCGGCATGGAGGGCTATGGCTGGGTCTTCGAAAGCTACCG AGATGGGGTACTCGAGGCCGACGATGAGGTCGGCGTGGTGCACGGCGACGCCGACGACGGCTACCCGGTCTTCGTCGACG CGCTGGTGAACATGCGCCACACCCTGGCGCGGGCCGTCGCAACTGGTGTGGTGTGCTCCGAGCTGGCCGAGCGGATCATC GAGACCGCGCGGGCCACACCGTTCACCATGCGCACCTGGGCGCGGCTGCTGAGTGAGGTCGGCGCCCCGGACCAGCGCGG CCTCGCCGCACAGTTGCGGTCACTGCGGGTCGATGTCAAACACGCCGATGCGCTGCTGGCGTTGCGGCAGCTCGGCCAGC GCCCCCGGGTGGAGCCGCTTCGTCCGGGTCCGCCGCCCACCGTGTGGTCGCGGCGGTGGCGGCAGCCATGGGCACCGCCC ACCTCCGTCGCCGCATCGGCCGACCACGGCGAGTCTTTTGTCGACGTCACCGACTTGGAGGTCTTGTCGTTTTTGAGCGT GAGCTCGGTTGACTACTGGGCCTACCGGCCAGCACTGCAACAGGTCGCTGCCTGGTACTGGACGTTGAAACACCCCGAAC AATCCGGAAGCGTCGGTGAGCGTGCCGCACGAGCCGTCGCCGAGGTGGCATCGGAGGGCTACGGGCGCGCCCTGGAATTC ATTGCCTATCGCTACGCACTTGCCACCGGCATCATCGACGAGACCGGCTTTCCCGAGGCGGTCGCAGCGCATTGGCTCAC CACCGAAGAGCGCCACGGCCTGGGCAATGACCCCATCTCGATCTCGGCGCGAGTGATCACCCGCACGTTGTTCGTCGTCC GGTTATTGCCGGCGATCGACCATTTCCTTGACCTGCTGCGGAAGGACTCCCGACTGCCCCGATGGCGTGCCATGGCGGCC CACGCACTCTGCAAGCGCGACGATCTGGCCCGGCAAAAGCCGCACCTGAACCTGGGCCGGCCCGATCCGACGCAATTGAA GCGCCTCTTTGGGGCCCGATGGGGGACCCAGGTGAACCGCATCGAGTTGGCCCGGCGTGGACTGATGACCGAGGACGCCT TCTATGCTGCCGCCACCCCGTTCGCCGTCGCGGCCGTCGACGACCAACTGCCGCGCATCGAGGTCGGCACCTTAGGACCC GCGCCGCTGAGCGCGGACGTTCCAGAACGCCATTTCGACTTCGGTTCCGTCTAA
Upstream 100 bases:
>100_bases GCGACTTCGCCGATGCCTGTGTCCCCGTGGTGAAGGTGCTCGCCCCGGGCCTCGTGCTGTCGAGCGCATCGCCGATGCGC ACACCCCTACAGGAGGCTGA
Downstream 100 bases:
>100_bases CTCGCGGCGCACGGTGGCGGGCTCCAGCGACTCGATATCCCAGCCAGCGCCACCGAGGACGTCGCGCAGCGTTTGCTCGG ATACCGTCGACCGCGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: TfuA Domain Protein Core; TfuA-Like Protein; Domain Protein; TfuA Domain Protein; TfuA Protein; Trifolitoxin Related Protein; Nifs Protein; TfuA Domain-Containing Protein Core; Antibiotic Resistance Protein; TfuA-Like; TfuA-Like Core
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELLTLMADGVRVVGS SSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERII ETARATPFTMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPP TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGERAARAVAEVASEGYGRALEF IAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAA HALCKRDDLARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP APLSADVPERHFDFGSV
Sequences:
>Translated_497_residues MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELLTLMADGVRVVGS SSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERII ETARATPFTMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPP TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGERAARAVAEVASEGYGRALEF IAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAA HALCKRDDLARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP APLSADVPERHFDFGSV >Mature_496_residues TACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQPSVRHKELLTLMADGVRVVGSS SMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVVHGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIE TARATPFTMRTWARLLSEVGAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPPT SVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGERAARAVAEVASEGYGRALEFI AYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPISISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAH ALCKRDDLARQKPHLNLGRPDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGPA PLSADVPERHFDFGSV
Specific function: Unknown
COG id: COG3482
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54459; Mature: 54327
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCC SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV CCHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEE HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE CHHCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCCCCC ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCCCEEECCCCC APLSADVPERHFDFGSV CCCCCCCCHHCCCCCCC >Mature Secondary Structure TACGRIVVTAGPTISAADIRSVVPDAEVAPPIAFGQALSYDLRSGDTLLIVDGLFFQQP CCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCC SVRHKELLTLMADGVRVVGSSSMGALRAAELHPFGMEGYGWVFESYRDGVLEADDEVGVV CCHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEE HGDADDGYPVFVDALVNMRHTLARAVATGVVCSELAERIIETARATPFTMRTWARLLSEV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC GAPDQRGLAAQLRSLRVDVKHADALLALRQLGQRPRVEPLRPGPPPTVWSRRWRQPWAPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC TSVAASADHGESFVDVTDLEVLSFLSVSSVDYWAYRPALQQVAAWYWTLKHPEQSGSVGE CHHCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RAARAVAEVASEGYGRALEFIAYRYALATGIIDETGFPEAVAAHWLTTEERHGLGNDPIS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCCCCCC ISARVITRTLFVVRLLPAIDHFLDLLRKDSRLPRWRAMAAHALCKRDDLARQKPHLNLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PDPTQLKRLFGARWGTQVNRIELARRGLMTEDAFYAAATPFAVAAVDDQLPRIEVGTLGP CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCCCEEECCCCC APLSADVPERHFDFGSV CCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA