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The map label for this gene is lprF

Identifier: 121637299

GI number: 121637299

Start: 1567534

End: 1568319

Strand: Direct

Name: lprF

Synonym: BCG_1430

Alternate gene names: 121637299

Gene position: 1567534-1568319 (Clockwise)

Preceding gene: 121637297

Following gene: 121637300

Centisome position: 35.83

GC content: 64.12

Gene sequence:

>786_bases
ATGAATGGCTTGATCTCACAAGCGTGCGGCTCCCACCGACCCCGGCGCCCCTCGAGCCTGGGGGCTGTCGCGATCCTGAT
CGCGGCGACACTTTTCGCGACTGTCGTTGCGGGGTGCGGGAAAAAACCGACCACGGCGAGCTCCCCGAGTCCCGGGTCGC
CGTCGCCGGAAGCCCAGCAGATCCTGCAAGACAGTTCCAAGGCGACGAAGGGCCTGCATTCCGTCCACGTGGTGGTGACG
GTAAACAATCTCTCGACCCTCCCGTTTGAGAGCGTCGATGCCGACGTGACCAACCAACCGCAGGGCAATGGCCAGGCGGT
GGGCAACGCCAAGGTCAGAATGAAGCCCAACACCCCGGTGGTGGCCACCGAGTTCCTGGTCACGAACAAGACCATGTACA
CGAAGCGGGGCGGCGACTATGTCTCGGTGGGTCCGGCGGAGAAGATCTATGACCCGGGCATCATCCTGGACAAGGACCGG
GGGCTGGGCGCGGTCGTCGGGCAAGTGCAAAACCCGACAATCCAGGGACGTGACGCCATCGACGGCCTGGCCACCGTCAA
GGTGTCCGGGACCATCGACGCCGCGGTGATCGATCCGATCGTGCCTCAGCTAGGTAAGGGTGGGGGCAGGCTCCCGATAA
CCTTGTGGATCGTCGACACCAACGCCTCAACGCCGGCACCCGCCGCGAACCTGGTGCGGATGGTCATTGACAAGGACCAA
GGCAACGTCGACATCACGCTGTCCAATTGGGGTGCGCCGGTCACCATCCCGAACCCGGCGGGATAA

Upstream 100 bases:

>100_bases
CAACCATGGACGGGGCTGGATTCGAGGCTCCGTGCATGCCGTACGACTAGGGGTAGCGCCCAGCTGCTCAATACCATCGG
TTGGATAACAAAGGCTGAAC

Downstream 100 bases:

>100_bases
CAGGCGCGAACCGGCCCGGTCCAGCCCCATCGCTGGTCGATGGCCTGGCCGGTCCGGTACTCGTCCGCGGGCGGAGGCCG
CCTTCGAAGAAATCCTTTGA

Product: putative lipoprotein lprF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQILQDSSKATKGLHSVHVVVT
VNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPVVATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDR
GLGAVVGQVQNPTIQGRDAIDGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQ
GNVDITLSNWGAPVTIPNPAG

Sequences:

>Translated_261_residues
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQILQDSSKATKGLHSVHVVVT
VNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPVVATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDR
GLGAVVGQVQNPTIQGRDAIDGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQ
GNVDITLSNWGAPVTIPNPAG
>Mature_261_residues
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQILQDSSKATKGLHSVHVVVT
VNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPVVATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDR
GLGAVVGQVQNPTIQGRDAIDGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQ
GNVDITLSNWGAPVTIPNPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lppX/lprAFG lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPRF_MYCBO (P65315)

Other databases:

- EMBL:   BX248338
- RefSeq:   NP_855057.1
- ProteinModelPortal:   P65315
- SMR:   P65315
- EnsemblBacteria:   EBMYCT00000016436
- GeneID:   1090694
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb1403
- GeneTree:   EBGT00050000017002
- HOGENOM:   HBG569188
- OMA:   WIVDTSA
- ProtClustDB:   CLSK791127
- BioCyc:   MBOV233413:MB1403-MONOMER
- InterPro:   IPR009830
- ProDom:   PD017293

Pfam domain/function: PF07161 DUF1396

EC number: NA

Molecular weight: Translated: 26852; Mature: 26852

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQ
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ILQDSSKATKGLHSVHVVVTVNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPV
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCE
VATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDRGLGAVVGQVQNPTIQGRDAI
EEEEEEEECCEEEEECCCCEEEECCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCC
DGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQ
CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCC
GNVDITLSNWGAPVTIPNPAG
CCEEEEECCCCCEEECCCCCC
>Mature Secondary Structure
MNGLISQACGSHRPRRPSSLGAVAILIAATLFATVVAGCGKKPTTASSPSPGSPSPEAQQ
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ILQDSSKATKGLHSVHVVVTVNNLSTLPFESVDADVTNQPQGNGQAVGNAKVRMKPNTPV
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCE
VATEFLVTNKTMYTKRGGDYVSVGPAEKIYDPGIILDKDRGLGAVVGQVQNPTIQGRDAI
EEEEEEEECCEEEEECCCCEEEECCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCC
DGLATVKVSGTIDAAVIDPIVPQLGKGGGRLPITLWIVDTNASTPAPAANLVRMVIDKDQ
CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCC
GNVDITLSNWGAPVTIPNPAG
CCEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972