Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637190
Identifier: 121637190
GI number: 121637190
Start: 1436652
End: 1437086
Strand: Reverse
Name: 121637190
Synonym: BCG_1321c
Alternate gene names: NA
Gene position: 1437086-1436652 (Counterclockwise)
Preceding gene: 121637194
Following gene: 121637189
Centisome position: 32.85
GC content: 67.13
Gene sequence:
>435_bases ATGCCCTGCGTGTTCTGTGCGATCATCGCCGGGGAGGCTCCGGCCATCCGGATCTACGAGGACGGCGGCTATCTCGCGAT CCTCGACATCCGCCCGTTCACCCGCGGCCACACGCTGGTGCTGCCCAAGCGACACACCGTTGACCTCACCGACACCCCGC CGGAGGCGTTGGCTGACATGGTCGCCATCGGCCAACGCATCGCGCGGGCGGCCCGCGCCACGAAGTTGGCTGACGCGACA CACATCGCCATCAACGACGGCCGTGCCGCTTTTCAGACGGTGTTCCACGTTCACTTGCACGTATTACCGCGGCGCAACGG CGACAAGCTGTCGGTCGCCAAGGGAATGATGCTGCGCCGCGACCCGGACCGGGAAGCCACCGGACGGATCCTGCGGGAGG CGCTGGCGCAACAGGATGCCGCTGCGCAAGACTGA
Upstream 100 bases:
>100_bases CTGTGCCGCGGCACCGGCGAAGGCCAGGTCAGTAGGGTCCACGGCGGCAGCGTATCCCGTTCACTTGGGCGGTCTCCGAG AGGTCCAGTACCGTAGCGAC
Downstream 100 bases:
>100_bases CCCCATGGACATTTCCCGATGGCTTGAGCGCCACGTAGGCGTGCAGCTGCTCAGGCTGCACGACGCGATCTACCGAGGCA CTAACGGTCGGATCGGACAC
Product: HIT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADAT HIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD
Sequences:
>Translated_144_residues MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADAT HIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD >Mature_143_residues PCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATH IAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17556280, Length=91, Percent_Identity=36.2637362637363, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320078, Length=139, Percent_Identity=34.5323741007194, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15740; Mature: 15609
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEECCCCCHHHHHHH VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRR HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEECCCCCEEHHHHCHHCCC DPDREATGRILREALAQQDAAAQD CCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADM CEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCEEECCCCCHHHHHHH VAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPRRNGDKLSVAKGMMLRR HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEEECCCCCEEHHHHCHHCCC DPDREATGRILREALAQQDAAAQD CCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]