Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637186
Identifier: 121637186
GI number: 121637186
Start: 1434054
End: 1434953
Strand: Direct
Name: 121637186
Synonym: BCG_1317
Alternate gene names: NA
Gene position: 1434054-1434953 (Clockwise)
Preceding gene: 121637183
Following gene: 121637187
Centisome position: 32.78
GC content: 68.44
Gene sequence:
>900_bases ATGAATATCGCGGCTGAATCTAGCGCCAAACCGGTATGGGGGCCACCGAATTTCTGCGCTGCCGCAGCCCGGATGCAGGA TGTTCGTGTGCTCATGCATCCGAAGACCGGCCGGGCGTTCAGGTCCCCGGTAGAGCCCGGTTCCGGCTGGCCAGGTGATC CGGCGACACCGCAGACCCCGGTGGCTGCCGATGCCGCGCAGGTGTCAGCGCTGGCCGGGGGCGCTGGCTCGATCTGCGAA CTCAACGCGCTGATCAGCGTGTGCCGGGCGTGTCCCCGGCTGGTCAGTTGGCGTGAGGAGGTCGCCGTCGTCAAGCGCCG TGCCTTCGCCGACCAGCCCTACTGGGGGCGCCCGGTGCCGGGGTGGGGGTCGAAGCGGCCGCGGTTGCTGATCCTCGGGC TGGCGCCCGCCGCGCACGGGGCCAACCGGACCGGACGAATGTTCACCGGCGATCGGTCGGGAGATCAGCTTTATGCAGCA CTGCATAGGGCCGGCCTGGTGAACTCACCGGTCAGCGTCGACGCCGCGGACGGGCTGCGGGCCAACCGGATTCGGATCAC CGCACCGGTGCGGTGTGCGCCCCCGGGCAACTCGCCGACACCGGCCGAGCGGCTGACATGCTCACCCTGGCTAAATGCGG AATGGCGGCTGGTGTCCGATCACATCCGTGCGATCGTCGCCCTCGGCGGGTTCGCCTGGCAGGTCGCGTTGCGCCTGGCG GGCGCGTCGGGGACACCCAAGCCGCGGTTCGGCCACGGCGTCGTTACCGAGCTGGGAGCCGGTGTGCGGCTACTGGGCTG CTACCACCCGAGCCAGCAGAATATGTTCACCGGTAGGTTGACTCCTACGATGCTCGACGACATTTTCCGTGAGGCCAAGA AGCTGGCCGGGATTGAGTGA
Upstream 100 bases:
>100_bases CACCAGCCACGGAAACGCGACTATCGAGACGCCATCACCCGCGGCCGCCATCAGCGTTGCGAACAGGATCAGGAATGCCG GGCCGCGGTTGCTGTTTCTC
Downstream 100 bases:
>100_bases CGTGAAGACGGTTGTGGTTTCCGGCGCCAGTGTGGCCGGTACGGCGGCGGCGTACTGGCTTGGGCGGCACGGCTATTCGG TAACGATGGTGGAGCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICE LNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAA LHRAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE
Sequences:
>Translated_299_residues MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICE LNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAA LHRAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE >Mature_299_residues MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICE LNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAA LHRAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1105 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: NA
Molecular weight: Translated: 31784; Mature: 31784
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTP CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCC VAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVP CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALHRAGLVNSPVSVDAADGLR CCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCC ANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA CCEEEEEECEEECCCCCCCCCHHHEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHC GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE CCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIAAESSAKPVWGPPNFCAAAARMQDVRVLMHPKTGRAFRSPVEPGSGWPGDPATPQTP CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCC VAADAAQVSALAGGAGSICELNALISVCRACPRLVSWREEVAVVKRRAFADQPYWGRPVP CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWGSKRPRLLILGLAPAAHGANRTGRMFTGDRSGDQLYAALHRAGLVNSPVSVDAADGLR CCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCC ANRIRITAPVRCAPPGNSPTPAERLTCSPWLNAEWRLVSDHIRAIVALGGFAWQVALRLA CCEEEEEECEEECCCCCCCCCHHHEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHC GASGTPKPRFGHGVVTELGAGVRLLGCYHPSQQNMFTGRLTPTMLDDIFREAKKLAGIE CCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]