Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637146
Identifier: 121637146
GI number: 121637146
Start: 1389875
End: 1391521
Strand: Reverse
Name: 121637146
Synonym: BCG_1277c
Alternate gene names: NA
Gene position: 1391521-1389875 (Counterclockwise)
Preceding gene: 121637147
Following gene: 121637145
Centisome position: 31.81
GC content: 69.95
Gene sequence:
>1647_bases GTGAGCAGTACGGTCATCGATCGCGCGAGACCCGCAGGACACCGTGCACCACACCGCGGTTCGGGCTTCACCGGCACACT GGGGTTGCTGCGCCTGTACCTGCGCCGCGACCGGGTGTCGTTGCCGCTGTGGGTGCTGCTGCTGTCGGTGCCGCTGGCCA CCGTGTACATCGCCAGCGTCGAAACGGTTTACCCCGACCGGTCCGCCCGCGCCGCCGCGGCGGCCGCCATTATGGCCAGC CCGGCACAGCGCGCGCTCTACGGGCCGGTCTACAACGACAGCCTGGGTGCGGTCGGAATCTGGAAAGCCGGGATGTTTCA CACCCTCATCGCGGTGGCGGTCATCCTCACGGTGATTCGGCACACCCGCGCGGACGAGGAAAGCGGCCGTGCCGAATTGA TCGATTCGACCGTGGTCGGGCGCTACGCCAACCTCACCGGCGCGCTGCTGCTGTCGTTCGGTGCGTCGATCGCGACCGGC GCGATCGGTGCATTGGGTCTGCTTGCCACCGATGTGGCTCCGGCCGGGTCGGTAGCGTTTGGCGTGGCGCTGGCGGCCTC CGGGATGGTCTTCACGGCGGTGGCCGCGGTGGCCGCGCAGCTGTCGCCGAGCGCCCGATTCACCCGCGCGGTCGCGTTCG CCGTCCTGGGCACCGCGTTCGCGCTGCGTGCCATCGGTGATGCCGGCTCGGGCACGCTGTCCTGGTGCTCGCCGCTGGGG TGGTCGCTGCAGGTCAGACCCTACGCGGGAGAGCGTTGGTGGGTGCTGCTGCTGTCGCTGGCGACCGCGGCCGTGCTTAC CGTGCTGGCCTATCGATTACGCGCCGGCCGTGATGTCGGTGCCGGACTGATCGCCGAACGCCCCGGCGCCGGCACCGCCG GGCCCATGCTGAGCGAGCCCTTCGGGCTGGCATGGCGGCTCAATCGCGGCTCCCTGCTGTTGTGGACCGTCGGCCTGTGC CTGTACGGGCTGGTGATGGGCAGTGTGGTGCACGGCATCGGGGATCAGCTGGGCGATAACACCGCGGTGCGTGACATCGT CACCCGGATGGGCGGCACCGGCGCACTGGAACAGGCCTTCCTTGCGCTGGCCTTCACCATGATCGGCATGGTCGCCGCCG CATTCGCCGTCTCGCTGACCCTACGACTGCACCAAGAGGAAACCGGGCTGCGGGCCGAGACCCTGCTCGCCGGGGCGGTT TCCCGGACCCATTGGCTGGCAAGCCATCTGGCGATGGCGCTGGCCGGATCGGCGGTGGCGACCCTGATCTCCGGCGTGGC GGCCGGACTCGCCTACGGCATGACCGTCGGTGACGTCGGCGGCAAGCTGCCCACCGTGGTCGGCACCGCGGCCGTGCAAC TGCCGGCCGTGTGGTTGTTATCGGCGGTGACCGTGGGATTGTTCGGGTTGGCGCCGCGGTTCACGCCGGTGGCGTGGGGC GTGCTGGTCGGGTTCATCGCGCTGTACCTGCTCGGCTCGTTGGCGGGGTTCCCGCAGATGCTGCTCAACCTGGAGCCGTT CGCCCACATCCCGCGGGTCGGCGGCGGCGATTTCACCGCGGTGCCGTTGCTGTGGCTGCTGGCCATAGATGCGGCCCTGA TCACCCTGGGCGCCATGGCCTTCCGACGGCGTGACGTTCGCTGCTAG
Upstream 100 bases:
>100_bases TGCGCAGCCTGGTCAGTCAGCCGCCCACCCTGGAGGAGCTGTTCCTGCGCCACTACAGCCTGGGCCCCGAGGTCGCAGCC GAGCAACAGGTGGCAACGCC
Downstream 100 bases:
>100_bases GAGGAGCCATGCACATTGGGCTGAAGATATTCATATGGGGCGTGTTAGGACTCGTCGTTTTCGGCGCGCTCCTATTCGGG CCAGCCGGCACGTTCGACTA
Product: putative tetronasin-transport integral membrane protein ABC transporter
Products: NA
Alternate protein names: ABC Transporter Membrane-Spanning Protein; Exporter Of Polyketide Antibiotics; Anibiotic ABC Transporter Efflux Pump; ABC Transporter Membrane Protein; ABC Transporter; ABC Transporter Permease Protein; ABC Antibiotics Transporter; Exporter Of Polyketide Antibiotics- Like Protein; ABC Transporter Permease; Tetronasin Resistance Transmembrane Protein; Abc Transporter Integral Membrane Subunit; ABC-2 Type Transport System Permease Protein; ABC Transporter Transmembrane Subunit; ABC Transporter Polyketide Tetronasin Permease; ABC Type Transport System Permease Protein; Tetronasin-Transport Membrane Protein ABC Transporter; TnrB3 Protein; Polyketide Antibiotics Exporter; Amino Acid Permease
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MSSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLSVPLATVYIASVETVYPDRSARAAAAAAIMAS PAQRALYGPVYNDSLGAVGIWKAGMFHTLIAVAVILTVIRHTRADEESGRAELIDSTVVGRYANLTGALLLSFGASIATG AIGALGLLATDVAPAGSVAFGVALAASGMVFTAVAAVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGTLSWCSPLG WSLQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGTAGPMLSEPFGLAWRLNRGSLLLWTVGLC LYGLVMGSVVHGIGDQLGDNTAVRDIVTRMGGTGALEQAFLALAFTMIGMVAAAFAVSLTLRLHQEETGLRAETLLAGAV SRTHWLASHLAMALAGSAVATLISGVAAGLAYGMTVGDVGGKLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWG VLVGFIALYLLGSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMAFRRRDVRC
Sequences:
>Translated_548_residues MSSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLSVPLATVYIASVETVYPDRSARAAAAAAIMAS PAQRALYGPVYNDSLGAVGIWKAGMFHTLIAVAVILTVIRHTRADEESGRAELIDSTVVGRYANLTGALLLSFGASIATG AIGALGLLATDVAPAGSVAFGVALAASGMVFTAVAAVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGTLSWCSPLG WSLQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGTAGPMLSEPFGLAWRLNRGSLLLWTVGLC LYGLVMGSVVHGIGDQLGDNTAVRDIVTRMGGTGALEQAFLALAFTMIGMVAAAFAVSLTLRLHQEETGLRAETLLAGAV SRTHWLASHLAMALAGSAVATLISGVAAGLAYGMTVGDVGGKLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWG VLVGFIALYLLGSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMAFRRRDVRC >Mature_547_residues SSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLSVPLATVYIASVETVYPDRSARAAAAAAIMASP AQRALYGPVYNDSLGAVGIWKAGMFHTLIAVAVILTVIRHTRADEESGRAELIDSTVVGRYANLTGALLLSFGASIATGA IGALGLLATDVAPAGSVAFGVALAASGMVFTAVAAVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGTLSWCSPLGW SLQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGTAGPMLSEPFGLAWRLNRGSLLLWTVGLCL YGLVMGSVVHGIGDQLGDNTAVRDIVTRMGGTGALEQAFLALAFTMIGMVAAAFAVSLTLRLHQEETGLRAETLLAGAVS RTHWLASHLAMALAGSAVATLISGVAAGLAYGMTVGDVGGKLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWGV LVGFIALYLLGSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMAFRRRDVRC
Specific function: Unknown
COG id: COG3559
COG function: function code M; Putative exporter of polyketide antibiotics
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56651; Mature: 56520
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLSVPLATVYIASV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ETVYPDRSARAAAAAAIMASPAQRALYGPVYNDSLGAVGIWKAGMFHTLIAVAVILTVIR HHCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HTRADEESGRAELIDSTVVGRYANLTGALLLSFGASIATGAIGALGLLATDVAPAGSVAF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH GVALAASGMVFTAVAAVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGTLSWCSPLG HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC WSLQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGTAGPMLSEP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC FGLAWRLNRGSLLLWTVGLCLYGLVMGSVVHGIGDQLGDNTAVRDIVTRMGGTGALEQAF CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH LALAFTMIGMVAAAFAVSLTLRLHQEETGLRAETLLAGAVSRTHWLASHLAMALAGSAVA HHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLISGVAAGLAYGMTVGDVGGKLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWG HHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLVGFIALYLLGSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRRRDVRC HHHHCCCC >Mature Secondary Structure SSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLSVPLATVYIASV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ETVYPDRSARAAAAAAIMASPAQRALYGPVYNDSLGAVGIWKAGMFHTLIAVAVILTVIR HHCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HTRADEESGRAELIDSTVVGRYANLTGALLLSFGASIATGAIGALGLLATDVAPAGSVAF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH GVALAASGMVFTAVAAVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGTLSWCSPLG HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC WSLQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGTAGPMLSEP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC FGLAWRLNRGSLLLWTVGLCLYGLVMGSVVHGIGDQLGDNTAVRDIVTRMGGTGALEQAF CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH LALAFTMIGMVAAAFAVSLTLRLHQEETGLRAETLLAGAVSRTHWLASHLAMALAGSAVA HHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLISGVAAGLAYGMTVGDVGGKLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWG HHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VLVGFIALYLLGSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRRRDVRC HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA